Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SIX2Q9NPC8 AL049838.1-201ENST00000563647 981 ntBASIC4.48□□□□□ -1.69
SIX2Q9NPC8 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
SIX2Q9NPC8 AL139395.1-201ENST00000603662 160 ntBASIC4.48□□□□□ -1.69
SIX2Q9NPC8 AC019131.2-201ENST00000609071 870 ntBASIC4.48□□□□□ -1.69
SIX2Q9NPC8 AC124016.2-201ENST00000610058 665 ntBASIC4.48□□□□□ -1.69
SIX2Q9NPC8 MIR7151-201ENST00000617477 60 ntBASIC4.48□□□□□ -1.69
SIX2Q9NPC8 AC084824.4-201ENST00000620106 731 ntBASIC4.48□□□□□ -1.69
SIX2Q9NPC8 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.48□□□□□ -1.69
SIX2Q9NPC8 AP000843.1-201ENST00000624880 701 ntBASIC4.48□□□□□ -1.69
SIX2Q9NPC8 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.48□□□□□ -1.69
SIX2Q9NPC8 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SIX2Q9NPC8 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.48□□□□□ -1.69
SIX2Q9NPC8 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
SIX2Q9NPC8 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.48□□□□□ -1.69
SIX2Q9NPC8 CCT8P1-201ENST00000413611 1657 ntBASIC4.48□□□□□ -1.69
SIX2Q9NPC8 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
SIX2Q9NPC8 ERCC6-202ENST00000374127 1782 ntBASIC4.48□□□□□ -1.69
SIX2Q9NPC8 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SIX2Q9NPC8 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SIX2Q9NPC8 AL627171.1-201ENST00000618845 1308 ntBASIC4.47□□□□□ -1.69
SIX2Q9NPC8 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
SIX2Q9NPC8 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
SIX2Q9NPC8 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.47□□□□□ -1.69
SIX2Q9NPC8 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SIX2Q9NPC8 MTCO1P15-201ENST00000529569 1526 ntBASIC4.47□□□□□ -1.69
SIX2Q9NPC8 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.47□□□□□ -1.69
SIX2Q9NPC8 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SIX2Q9NPC8 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.47□□□□□ -1.69
SIX2Q9NPC8 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SIX2Q9NPC8 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.47□□□□□ -1.69
SIX2Q9NPC8 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
SIX2Q9NPC8 MIR937-201ENST00000401271 86 ntBASIC4.47□□□□□ -1.69
SIX2Q9NPC8 RNU4-74P-201ENST00000411280 161 ntBASIC4.47□□□□□ -1.69
SIX2Q9NPC8 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.47□□□□□ -1.69
SIX2Q9NPC8 TCEA1P2-201ENST00000420496 906 ntBASIC4.47□□□□□ -1.69
SIX2Q9NPC8 MTCO1P54-201ENST00000430139 712 ntBASIC4.47□□□□□ -1.69
SIX2Q9NPC8 AL353748.1-201ENST00000440753 474 ntBASIC4.47□□□□□ -1.69
SIX2Q9NPC8 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.47□□□□□ -1.69
SIX2Q9NPC8 RPS27P5-201ENST00000444247 244 ntBASIC4.47□□□□□ -1.69
SIX2Q9NPC8 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.47□□□□□ -1.69
SIX2Q9NPC8 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.47□□□□□ -1.69
SIX2Q9NPC8 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.47□□□□□ -1.69
SIX2Q9NPC8 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.47□□□□□ -1.69
SIX2Q9NPC8 OFD1P3Y-201ENST00000453312 783 ntBASIC4.47□□□□□ -1.69
SIX2Q9NPC8 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC4.47□□□□□ -1.69
SIX2Q9NPC8 snoU109.3-201ENST00000459477 145 ntBASIC4.47□□□□□ -1.69
SIX2Q9NPC8 RPL21P18-201ENST00000469899 480 ntBASIC4.47□□□□□ -1.69
SIX2Q9NPC8 RPL21P47-201ENST00000483696 477 ntBASIC4.47□□□□□ -1.69
SIX2Q9NPC8 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.47□□□□□ -1.69
SIX2Q9NPC8 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.47□□□□□ -1.69
SIX2Q9NPC8 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.47□□□□□ -1.69
SIX2Q9NPC8 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.47□□□□□ -1.69
SIX2Q9NPC8 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.47□□□□□ -1.69
SIX2Q9NPC8 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.47□□□□□ -1.69
SIX2Q9NPC8 AP000916.1-201ENST00000533869 835 ntBASIC4.47□□□□□ -1.69
SIX2Q9NPC8 PSMB7P1-201ENST00000556349 514 ntBASIC4.47□□□□□ -1.69
SIX2Q9NPC8 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.47□□□□□ -1.69
SIX2Q9NPC8 AC023825.1-201ENST00000566704 1030 ntBASIC4.47□□□□□ -1.69
SIX2Q9NPC8 AC106734.1-201ENST00000568646 663 ntBASIC4.47□□□□□ -1.69
SIX2Q9NPC8 AC079171.1-201ENST00000568788 914 ntBASIC4.47□□□□□ -1.69
SIX2Q9NPC8 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
SIX2Q9NPC8 SNX6P1-201ENST00000601728 1224 ntBASIC4.47□□□□□ -1.69
SIX2Q9NPC8 AC069431.2-201ENST00000604149 1099 ntBASIC4.47□□□□□ -1.69
SIX2Q9NPC8 AC114878.2-201ENST00000604863 1251 ntBASIC4.47□□□□□ -1.69
SIX2Q9NPC8 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.47□□□□□ -1.69
SIX2Q9NPC8 AC011944.2-201ENST00000624440 683 ntBASIC4.47□□□□□ -1.69
SIX2Q9NPC8 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.47□□□□□ -1.69
SIX2Q9NPC8 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.47□□□□□ -1.69
SIX2Q9NPC8 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SIX2Q9NPC8 AL133243.3-201ENST00000617415 3004 ntBASIC4.47□□□□□ -1.69
SIX2Q9NPC8 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SIX2Q9NPC8 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
SIX2Q9NPC8 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
SIX2Q9NPC8 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SIX2Q9NPC8 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SIX2Q9NPC8 RNA5SP366-201ENST00000365454 123 ntBASIC4.46□□□□□ -1.7
SIX2Q9NPC8 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SIX2Q9NPC8 RNU6-1005P-201ENST00000384519 107 ntBASIC4.46□□□□□ -1.7
SIX2Q9NPC8 RN7SKP182-201ENST00000410772 298 ntBASIC4.46□□□□□ -1.7
SIX2Q9NPC8 MTCO2P8-201ENST00000412213 658 ntBASIC4.46□□□□□ -1.7
SIX2Q9NPC8 AC011933.1-201ENST00000413334 321 ntBASIC4.46□□□□□ -1.7
SIX2Q9NPC8 AL445183.3-201ENST00000414168 502 ntBASIC4.46□□□□□ -1.7
SIX2Q9NPC8 XKRYP4-201ENST00000414395 483 ntBASIC4.46□□□□□ -1.7
SIX2Q9NPC8 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.46□□□□□ -1.7
SIX2Q9NPC8 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC4.46□□□□□ -1.7
SIX2Q9NPC8 AC241520.1-201ENST00000422654 1099 ntBASIC4.46□□□□□ -1.7
SIX2Q9NPC8 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.46□□□□□ -1.7
SIX2Q9NPC8 USP12PY-201ENST00000427677 1064 ntBASIC4.46□□□□□ -1.7
SIX2Q9NPC8 BTF3P10-201ENST00000433415 495 ntBASIC4.46□□□□□ -1.7
SIX2Q9NPC8 AC093716.1-201ENST00000435923 377 ntBASIC4.46□□□□□ -1.7
SIX2Q9NPC8 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC4.46□□□□□ -1.7
SIX2Q9NPC8 RRM2P4-201ENST00000441721 562 ntBASIC4.46□□□□□ -1.7
SIX2Q9NPC8 AC006011.1-201ENST00000442758 349 ntBASIC4.46□□□□□ -1.7
SIX2Q9NPC8 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.46□□□□□ -1.7
SIX2Q9NPC8 RPL6P5-201ENST00000445678 828 ntBASIC4.46□□□□□ -1.7
SIX2Q9NPC8 EIF2S2P2-201ENST00000447161 982 ntBASIC4.46□□□□□ -1.7
SIX2Q9NPC8 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
SIX2Q9NPC8 XKRYP5-201ENST00000449659 483 ntBASIC4.46□□□□□ -1.7
SIX2Q9NPC8 HMGB1P5-202ENST00000451497 985 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms