Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CHD8Q9HCK8 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CHD8Q9HCK8 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CHD8Q9HCK8 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CHD8Q9HCK8 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CHD8Q9HCK8 SNORA71B-202ENST00000439232 272 ntBASIC3.66□□□□□ -1.82
CHD8Q9HCK8 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.66□□□□□ -1.82
CHD8Q9HCK8 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CHD8Q9HCK8 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CHD8Q9HCK8 AC012417.1-201ENST00000582307 1039 ntBASIC3.66□□□□□ -1.82
CHD8Q9HCK8 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.66□□□□□ -1.82
CHD8Q9HCK8 AL606834.2-201ENST00000602954 668 ntBASIC3.66□□□□□ -1.82
CHD8Q9HCK8 AC091167.4-201ENST00000605079 184 ntBASIC3.66□□□□□ -1.82
CHD8Q9HCK8 AC007786.3-201ENST00000615154 596 ntBASIC3.66□□□□□ -1.82
CHD8Q9HCK8 AC022417.1-201ENST00000624768 1303 ntBASIC3.66□□□□□ -1.82
CHD8Q9HCK8 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CHD8Q9HCK8 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
CHD8Q9HCK8 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
CHD8Q9HCK8 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CHD8Q9HCK8 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.66□□□□□ -1.82
CHD8Q9HCK8 ADAM5-202ENST00000399789 1942 ntBASIC3.66□□□□□ -1.82
CHD8Q9HCK8 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC3.66□□□□□ -1.82
CHD8Q9HCK8 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CHD8Q9HCK8 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CHD8Q9HCK8 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.66□□□□□ -1.82
CHD8Q9HCK8 AL035407.1-201ENST00000429211 571 ntBASIC3.66□□□□□ -1.82
CHD8Q9HCK8 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.66□□□□□ -1.82
CHD8Q9HCK8 DEFB122-202ENST00000569013 197 ntBASIC3.66□□□□□ -1.82
CHD8Q9HCK8 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC3.66□□□□□ -1.82
CHD8Q9HCK8 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC3.66□□□□□ -1.82
CHD8Q9HCK8 AC139426.3-201ENST00000605648 2059 ntBASIC3.66□□□□□ -1.82
CHD8Q9HCK8 CAST-202ENST00000325674 3356 ntTSL 5 BASIC3.66□□□□□ -1.82
CHD8Q9HCK8 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CHD8Q9HCK8 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CHD8Q9HCK8 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CHD8Q9HCK8 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CHD8Q9HCK8 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CHD8Q9HCK8 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CHD8Q9HCK8 AC027287.1-201ENST00000553115 1453 ntBASIC3.66□□□□□ -1.82
CHD8Q9HCK8 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CHD8Q9HCK8 RNA5SP97-201ENST00000365006 84 ntBASIC3.65□□□□□ -1.82
CHD8Q9HCK8 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.65□□□□□ -1.82
CHD8Q9HCK8 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.65□□□□□ -1.82
CHD8Q9HCK8 RPL23AP69-201ENST00000431134 458 ntBASIC3.65□□□□□ -1.82
CHD8Q9HCK8 RPL35AP21-201ENST00000437667 333 ntBASIC3.65□□□□□ -1.82
CHD8Q9HCK8 AC005002.1-201ENST00000447458 540 ntBASIC3.65□□□□□ -1.82
CHD8Q9HCK8 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.65□□□□□ -1.82
CHD8Q9HCK8 DDX39BP2-208ENST00000453923 258 ntBASIC3.65□□□□□ -1.82
CHD8Q9HCK8 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.65□□□□□ -1.82
CHD8Q9HCK8 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.65□□□□□ -1.82
CHD8Q9HCK8 MIR3162-201ENST00000581818 82 ntBASIC3.65□□□□□ -1.82
CHD8Q9HCK8 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
CHD8Q9HCK8 AP003485.2-201ENST00000623636 610 ntBASIC3.65□□□□□ -1.82
CHD8Q9HCK8 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.65□□□□□ -1.82
CHD8Q9HCK8 FRG1EP-201ENST00000634469 770 ntBASIC3.65□□□□□ -1.82
CHD8Q9HCK8 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC3.65□□□□□ -1.82
CHD8Q9HCK8 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC3.65□□□□□ -1.82
CHD8Q9HCK8 AL359693.1-201ENST00000614959 2407 ntBASIC3.65□□□□□ -1.82
CHD8Q9HCK8 AC097461.1-201ENST00000568928 2821 ntBASIC3.65□□□□□ -1.82
CHD8Q9HCK8 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CHD8Q9HCK8 LINC01109-201ENST00000603837 3081 ntBASIC3.65□□□□□ -1.83
CHD8Q9HCK8 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.65□□□□□ -1.83
CHD8Q9HCK8 MTND4LP17-201ENST00000414607 293 ntBASIC3.65□□□□□ -1.83
CHD8Q9HCK8 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
CHD8Q9HCK8 RHEBP2-201ENST00000450289 600 ntBASIC3.65□□□□□ -1.83
CHD8Q9HCK8 RBMY2UP-201ENST00000453474 324 ntBASIC3.65□□□□□ -1.83
CHD8Q9HCK8 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.65□□□□□ -1.83
CHD8Q9HCK8 RPL21P10-201ENST00000463521 490 ntBASIC3.65□□□□□ -1.83
CHD8Q9HCK8 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.65□□□□□ -1.83
CHD8Q9HCK8 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.65□□□□□ -1.83
CHD8Q9HCK8 RNA5SP497-201ENST00000516081 97 ntBASIC3.65□□□□□ -1.83
CHD8Q9HCK8 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.65□□□□□ -1.83
CHD8Q9HCK8 AC019227.1-201ENST00000526902 510 ntBASIC3.65□□□□□ -1.83
CHD8Q9HCK8 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.65□□□□□ -1.83
CHD8Q9HCK8 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.65□□□□□ -1.83
CHD8Q9HCK8 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CHD8Q9HCK8 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC3.65□□□□□ -1.83
CHD8Q9HCK8 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.65□□□□□ -1.83
CHD8Q9HCK8 MTCO1P9-201ENST00000505577 1534 ntBASIC3.65□□□□□ -1.83
CHD8Q9HCK8 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
CHD8Q9HCK8 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC3.65□□□□□ -1.83
CHD8Q9HCK8 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
CHD8Q9HCK8 CCAT2-201ENST00000630920 1752 ntBASIC3.65□□□□□ -1.83
CHD8Q9HCK8 Y_RNA.355-201ENST00000365462 98 ntBASIC3.64□□□□□ -1.83
CHD8Q9HCK8 SEPT7P2-202ENST00000398921 823 ntBASIC3.64□□□□□ -1.83
CHD8Q9HCK8 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.64□□□□□ -1.83
CHD8Q9HCK8 EIF4HP2-201ENST00000424380 563 ntBASIC3.64□□□□□ -1.83
CHD8Q9HCK8 BX276092.6-201ENST00000430476 250 ntBASIC3.64□□□□□ -1.83
CHD8Q9HCK8 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.64□□□□□ -1.83
CHD8Q9HCK8 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.64□□□□□ -1.83
CHD8Q9HCK8 UBE2V2P4-201ENST00000447495 259 ntBASIC3.64□□□□□ -1.83
CHD8Q9HCK8 BX276092.8-201ENST00000455722 250 ntBASIC3.64□□□□□ -1.83
CHD8Q9HCK8 MTND6P32-201ENST00000457611 483 ntBASIC3.64□□□□□ -1.83
CHD8Q9HCK8 snoU13.26-201ENST00000459452 105 ntBASIC3.64□□□□□ -1.83
CHD8Q9HCK8 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.64□□□□□ -1.83
CHD8Q9HCK8 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CHD8Q9HCK8 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.64□□□□□ -1.83
CHD8Q9HCK8 RANP9-201ENST00000519957 271 ntBASIC3.64□□□□□ -1.83
CHD8Q9HCK8 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.64□□□□□ -1.83
CHD8Q9HCK8 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms