Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 TATDN1P1-201ENST00000414123 891 ntBASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 MTND2P15-201ENST00000418575 892 ntBASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 AL606495.1-201ENST00000422100 813 ntBASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 AC002069.1-201ENST00000429649 1159 ntBASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 BMS1P19-201ENST00000433925 393 ntBASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 AC009263.1-201ENST00000441193 1239 ntBASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 AC069277.2-201ENST00000454211 432 ntBASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 PPIAP15-201ENST00000479662 484 ntBASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 C1GALT1P2-201ENST00000510813 1104 ntBASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 USP9YP5-201ENST00000511770 630 ntBASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 KCTD9P2-201ENST00000512203 1013 ntBASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 AC108120.2-201ENST00000512973 294 ntBASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 AC068339.2-201ENST00000534395 618 ntBASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 AC079171.1-201ENST00000568788 914 ntBASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 AC104072.1-201ENST00000568817 668 ntBASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 CBX3P2-202ENST00000583365 535 ntBASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 MIR4737-201ENST00000583979 81 ntBASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 AL031320.1-201ENST00000604177 357 ntBASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 Z82195.1-201ENST00000604558 398 ntBASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 AL391834.1-201ENST00000609609 560 ntBASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 AL133243.1-201ENST00000614487 366 ntBASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 AC018926.1-201ENST00000616335 435 ntBASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 FRG1DP-201ENST00000635586 771 ntBASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.15□□□□□ -1.74
CCDC28BQ9BUN5 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CCDC28BQ9BUN5 AL359715.4-201ENST00000606629 1436 ntBASIC4.15□□□□□ -1.74
CCDC28BQ9BUN5 AC007342.7-201ENST00000624610 2337 ntBASIC4.15□□□□□ -1.74
CCDC28BQ9BUN5 MARK2P15-201ENST00000432204 2186 ntBASIC4.15□□□□□ -1.75
CCDC28BQ9BUN5 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.15□□□□□ -1.75
CCDC28BQ9BUN5 RNA5SP175-201ENST00000364275 119 ntBASIC4.15□□□□□ -1.75
CCDC28BQ9BUN5 RNU4-7P-201ENST00000364758 141 ntBASIC4.15□□□□□ -1.75
CCDC28BQ9BUN5 SNORA37-201ENST00000384504 129 ntBASIC4.15□□□□□ -1.75
CCDC28BQ9BUN5 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.15□□□□□ -1.75
CCDC28BQ9BUN5 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC28BQ9BUN5 AC019050.1-201ENST00000418508 492 ntBASIC4.15□□□□□ -1.75
CCDC28BQ9BUN5 RPA2P2-201ENST00000419698 796 ntBASIC4.15□□□□□ -1.75
CCDC28BQ9BUN5 AC079355.1-201ENST00000421770 223 ntBASIC4.15□□□□□ -1.75
CCDC28BQ9BUN5 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC28BQ9BUN5 AL160175.1-201ENST00000428124 247 ntBASIC4.15□□□□□ -1.75
CCDC28BQ9BUN5 LYPLA1P1-201ENST00000434514 622 ntBASIC4.15□□□□□ -1.75
CCDC28BQ9BUN5 MTND2P2-201ENST00000434633 945 ntBASIC4.15□□□□□ -1.75
CCDC28BQ9BUN5 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC28BQ9BUN5 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.15□□□□□ -1.75
CCDC28BQ9BUN5 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC28BQ9BUN5 CLIC4P1-201ENST00000453177 535 ntBASIC4.15□□□□□ -1.75
CCDC28BQ9BUN5 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC28BQ9BUN5 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.15□□□□□ -1.75
CCDC28BQ9BUN5 AC020593.1-201ENST00000507399 299 ntBASIC4.15□□□□□ -1.75
CCDC28BQ9BUN5 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.15□□□□□ -1.75
CCDC28BQ9BUN5 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC28BQ9BUN5 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC28BQ9BUN5 AC005798.1-201ENST00000513715 387 ntBASIC4.15□□□□□ -1.75
CCDC28BQ9BUN5 AC110775.1-201ENST00000513721 462 ntBASIC4.15□□□□□ -1.75
CCDC28BQ9BUN5 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC28BQ9BUN5 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.75
CCDC28BQ9BUN5 C1DP5-201ENST00000525775 383 ntBASIC4.15□□□□□ -1.75
CCDC28BQ9BUN5 AC087888.1-201ENST00000550884 1254 ntBASIC4.15□□□□□ -1.75
CCDC28BQ9BUN5 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.15□□□□□ -1.75
CCDC28BQ9BUN5 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.15□□□□□ -1.75
CCDC28BQ9BUN5 AC091042.1-201ENST00000579213 173 ntBASIC4.15□□□□□ -1.75
CCDC28BQ9BUN5 AC126365.2-201ENST00000580630 379 ntBASIC4.15□□□□□ -1.75
CCDC28BQ9BUN5 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC28BQ9BUN5 AF230666.2-201ENST00000602328 725 ntBASIC4.15□□□□□ -1.75
CCDC28BQ9BUN5 AC133794.1-201ENST00000602731 914 ntBASIC4.15□□□□□ -1.75
CCDC28BQ9BUN5 AC004241.3-201ENST00000611728 517 ntBASIC4.15□□□□□ -1.75
CCDC28BQ9BUN5 MIR8084-201ENST00000614105 89 ntBASIC4.15□□□□□ -1.75
CCDC28BQ9BUN5 AC095038.2-201ENST00000621464 1070 ntBASIC4.15□□□□□ -1.75
CCDC28BQ9BUN5 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.15□□□□□ -1.75
CCDC28BQ9BUN5 AC068880.4-201ENST00000623082 495 ntBASIC4.15□□□□□ -1.75
CCDC28BQ9BUN5 MIR4302-201ENST00000638058 60 ntBASIC4.15□□□□□ -1.75
CCDC28BQ9BUN5 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms