Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC6.68□□□□□ -1.34
USB1Q9BQ65 KDM1B-203ENST00000546309 496 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
USB1Q9BQ65 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC6.68□□□□□ -1.34
USB1Q9BQ65 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC6.68□□□□□ -1.34
USB1Q9BQ65 MTND4LP5-201ENST00000605152 292 ntBASIC6.68□□□□□ -1.34
USB1Q9BQ65 AL512329.2-201ENST00000607350 548 ntBASIC6.68□□□□□ -1.34
USB1Q9BQ65 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC6.68□□□□□ -1.34
USB1Q9BQ65 AL451054.1-201ENST00000621770 772 ntBASIC6.68□□□□□ -1.34
USB1Q9BQ65 METAP1-212ENST00000625963 147 ntTSL 5 BASIC6.68□□□□□ -1.34
USB1Q9BQ65 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC6.68□□□□□ -1.34
USB1Q9BQ65 AC235565.1-201ENST00000456962 1325 ntBASIC6.68□□□□□ -1.34
USB1Q9BQ65 NUDT13-202ENST00000357321 2102 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
USB1Q9BQ65 AC116351.1-201ENST00000399869 3482 ntTSL 2 BASIC6.68□□□□□ -1.34
USB1Q9BQ65 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.68□□□□□ -1.34
USB1Q9BQ65 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
USB1Q9BQ65 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
USB1Q9BQ65 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
USB1Q9BQ65 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
USB1Q9BQ65 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
USB1Q9BQ65 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
USB1Q9BQ65 CEP57L1-214ENST00000521277 3832 ntTSL 2 BASIC6.67□□□□□ -1.34
USB1Q9BQ65 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
USB1Q9BQ65 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
USB1Q9BQ65 ZNF734P-201ENST00000419494 1534 ntBASIC6.67□□□□□ -1.34
USB1Q9BQ65 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
USB1Q9BQ65 AC092821.3-202ENST00000641304 2767 ntBASIC6.67□□□□□ -1.34
USB1Q9BQ65 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
USB1Q9BQ65 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC6.67□□□□□ -1.34
USB1Q9BQ65 RNA5SP378-201ENST00000363646 120 ntBASIC6.67□□□□□ -1.34
USB1Q9BQ65 AL139327.1-201ENST00000382988 348 ntBASIC6.67□□□□□ -1.34
USB1Q9BQ65 AL445529.1-201ENST00000398713 389 ntBASIC6.67□□□□□ -1.34
USB1Q9BQ65 Z99755.1-201ENST00000414048 380 ntBASIC6.67□□□□□ -1.34
USB1Q9BQ65 BX682237.1-201ENST00000415016 335 ntBASIC6.67□□□□□ -1.34
USB1Q9BQ65 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC6.67□□□□□ -1.34
USB1Q9BQ65 AC243428.1-201ENST00000421099 264 ntBASIC6.67□□□□□ -1.34
USB1Q9BQ65 SNX18P3-201ENST00000424993 835 ntBASIC6.67□□□□□ -1.34
USB1Q9BQ65 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC6.67□□□□□ -1.34
USB1Q9BQ65 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC6.67□□□□□ -1.34
USB1Q9BQ65 MRPS21P3-201ENST00000436696 262 ntBASIC6.67□□□□□ -1.34
USB1Q9BQ65 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC6.67□□□□□ -1.34
USB1Q9BQ65 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC6.67□□□□□ -1.34
USB1Q9BQ65 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC6.67□□□□□ -1.34
USB1Q9BQ65 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.67□□□□□ -1.34
USB1Q9BQ65 RPL21P8-201ENST00000465083 535 ntBASIC6.67□□□□□ -1.34
USB1Q9BQ65 RN7SL861P-201ENST00000473793 285 ntBASIC6.67□□□□□ -1.34
USB1Q9BQ65 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC6.67□□□□□ -1.34
USB1Q9BQ65 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.67□□□□□ -1.34
USB1Q9BQ65 RNU6-307P-201ENST00000516743 106 ntBASIC6.67□□□□□ -1.34
USB1Q9BQ65 Y_RNA.715-201ENST00000517082 110 ntBASIC6.67□□□□□ -1.34
USB1Q9BQ65 EEF1B2P2-201ENST00000519625 676 ntBASIC6.67□□□□□ -1.34
USB1Q9BQ65 FAM60DP-201ENST00000524174 632 ntBASIC6.67□□□□□ -1.34
USB1Q9BQ65 FXYD2-206ENST00000532119 562 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
USB1Q9BQ65 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.67□□□□□ -1.34
USB1Q9BQ65 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC6.67□□□□□ -1.34
USB1Q9BQ65 AC106782.4-201ENST00000568264 210 ntBASIC6.67□□□□□ -1.34
USB1Q9BQ65 MIR3941-201ENST00000582572 103 ntBASIC6.67□□□□□ -1.34
USB1Q9BQ65 MIR5692C1-201ENST00000585309 91 ntBASIC6.67□□□□□ -1.34
USB1Q9BQ65 CUX2P1-201ENST00000606426 298 ntBASIC6.67□□□□□ -1.34
USB1Q9BQ65 AC096772.1-201ENST00000609146 564 ntBASIC6.67□□□□□ -1.34
USB1Q9BQ65 AL353662.3-201ENST00000625131 237 ntBASIC6.67□□□□□ -1.34
USB1Q9BQ65 U6.104-201ENST00000637979 90 ntBASIC6.67□□□□□ -1.34
USB1Q9BQ65 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.67□□□□□ -1.34
USB1Q9BQ65 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
USB1Q9BQ65 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
USB1Q9BQ65 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
USB1Q9BQ65 AL512662.1-201ENST00000624850 2251 ntBASIC6.67□□□□□ -1.34
USB1Q9BQ65 TOPORS-202ENST00000379858 3621 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
USB1Q9BQ65 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
USB1Q9BQ65 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC6.67□□□□□ -1.34
USB1Q9BQ65 ZNF680-201ENST00000309683 3022 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
USB1Q9BQ65 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC6.67□□□□□ -1.34
USB1Q9BQ65 AC009318.1-201ENST00000553105 2380 ntTSL 2 BASIC6.67□□□□□ -1.34
USB1Q9BQ65 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
USB1Q9BQ65 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
USB1Q9BQ65 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
USB1Q9BQ65 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
USB1Q9BQ65 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC6.67□□□□□ -1.34
USB1Q9BQ65 FBXL4-202ENST00000369244 8035 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
USB1Q9BQ65 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
USB1Q9BQ65 FHL1-204ENST00000370683 2565 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
USB1Q9BQ65 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
USB1Q9BQ65 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
USB1Q9BQ65 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC6.66□□□□□ -1.34
USB1Q9BQ65 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.66□□□□□ -1.34
USB1Q9BQ65 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.66□□□□□ -1.34
USB1Q9BQ65 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
USB1Q9BQ65 AL133243.4-201ENST00000623116 3109 ntBASIC6.66□□□□□ -1.34
USB1Q9BQ65 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.66□□□□□ -1.34
USB1Q9BQ65 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.66□□□□□ -1.34
USB1Q9BQ65 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
USB1Q9BQ65 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
USB1Q9BQ65 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
USB1Q9BQ65 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
USB1Q9BQ65 HIST1H4F-201ENST00000244537 312 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
USB1Q9BQ65 Y_RNA.2-201ENST00000362330 96 ntBASIC6.66□□□□□ -1.34
USB1Q9BQ65 RN7SKP211-201ENST00000363328 315 ntBASIC6.66□□□□□ -1.34
USB1Q9BQ65 SNORD14.1-201ENST00000365609 90 ntBASIC6.66□□□□□ -1.34
USB1Q9BQ65 RNU6-1127P-201ENST00000384580 107 ntBASIC6.66□□□□□ -1.34
USB1Q9BQ65 MIR301B-201ENST00000390813 78 ntBASIC6.66□□□□□ -1.34
USB1Q9BQ65 RNU6-550P-201ENST00000391057 101 ntBASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms