Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 MYH10-202ENST00000360416 7762 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 CMKLR1-202ENST00000412676 5110 ntAPPRIS ALT2 TSL 3 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 TMEM51-AS1-201ENST00000310916 7100 ntTSL 2 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AP000997.2-201ENST00000564619 8400 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AL645568.2-201ENST00000432815 1337 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AP003119.3-201ENST00000566747 4192 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 OFD1P8Y-201ENST00000449148 1433 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 CHD7-201ENST00000423902 11568 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 MAN2A2-201ENST00000360468 6268 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 OR5H2-201ENST00000355273 945 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 Y_RNA.144-201ENST00000363521 113 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 RNU6-573P-201ENST00000383938 106 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 RNU1-46P-201ENST00000384425 164 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 RPL17P12-201ENST00000413391 526 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 BX119904.3-201ENST00000428194 957 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AL445928.1-201ENST00000435545 222 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AL606662.1-201ENST00000445763 553 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AC013399.1-201ENST00000450311 418 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 CREM-220ENST00000463314 964 ntTSL 2 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 PPIAP15-201ENST00000479662 484 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 RNU4-29P-201ENST00000515943 174 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 RNU6-762P-201ENST00000517107 102 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AC078878.1-201ENST00000539832 958 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AC005000.2-201ENST00000605468 310 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AC090607.5-201ENST00000615692 224 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 VN1R7P-201ENST00000619242 903 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 FKBP14-201ENST00000222803 4960 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 SYNPO2-201ENST00000307142 7295 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 SPATA31C1-201ENST00000420021 3895 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 SMU1-201ENST00000397149 7122 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 GPR161-201ENST00000271357 7806 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 MYOM1-201ENST00000261606 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 CACNB2-209ENST00000396576 4464 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 UVSSA-202ENST00000389851 12605 ntAPPRIS P2 TSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 LINC00559-201ENST00000569476 3867 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 OR10R3P-201ENST00000361688 942 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 MIR491-201ENST00000384877 84 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 GAPDHP15-201ENST00000398586 975 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 HIST1H3PS1-201ENST00000404612 417 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 RAP1BP1-201ENST00000412709 553 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 ZNF736P2Y-201ENST00000416040 1279 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 SNRPEP10-201ENST00000420249 274 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AL358176.3-201ENST00000420757 454 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AC005154.2-201ENST00000438110 379 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AC011816.1-201ENST00000441346 546 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 PRPF38AP1-201ENST00000451976 933 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AL359385.1-201ENST00000456509 365 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AC025518.1-201ENST00000479856 347 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AC114728.1-201ENST00000488289 483 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AC098799.2-201ENST00000509466 868 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 HSPE1P4-201ENST00000550617 308 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 RPL23AP91-201ENST00000569211 455 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 MIR3910-1-201ENST00000580936 111 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AC006539.2-201ENST00000601729 572 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AMER1-201ENST00000330258 8443 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 LRRC37A-202ENST00000393465 4997 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms