Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 ELOCP12-201ENST00000458706 328 ntBASIC4.46□□□□□ -1.7
VPS33AQ96AX1 snoU13.7-201ENST00000459220 104 ntBASIC4.46□□□□□ -1.7
VPS33AQ96AX1 SCARNA10-201ENST00000459255 330 ntBASIC4.46□□□□□ -1.7
VPS33AQ96AX1 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.46□□□□□ -1.7
VPS33AQ96AX1 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.46□□□□□ -1.7
VPS33AQ96AX1 RN7SL727P-201ENST00000482164 296 ntBASIC4.46□□□□□ -1.7
VPS33AQ96AX1 AC012158.1-204ENST00000483430 465 ntBASIC4.46□□□□□ -1.7
VPS33AQ96AX1 RN7SL30P-201ENST00000488416 306 ntBASIC4.46□□□□□ -1.7
VPS33AQ96AX1 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.46□□□□□ -1.7
VPS33AQ96AX1 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.46□□□□□ -1.7
VPS33AQ96AX1 AC106872.4-201ENST00000510050 523 ntBASIC4.46□□□□□ -1.7
VPS33AQ96AX1 C1GALT1P2-201ENST00000510813 1104 ntBASIC4.46□□□□□ -1.7
VPS33AQ96AX1 VWA8P1-201ENST00000510889 176 ntBASIC4.46□□□□□ -1.7
VPS33AQ96AX1 RPL7L1P4-201ENST00000513004 707 ntBASIC4.46□□□□□ -1.7
VPS33AQ96AX1 AC119751.1-201ENST00000513357 765 ntBASIC4.46□□□□□ -1.7
VPS33AQ96AX1 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VPS33AQ96AX1 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.46□□□□□ -1.7
VPS33AQ96AX1 AC022832.1-201ENST00000530718 645 ntBASIC4.46□□□□□ -1.7
VPS33AQ96AX1 CYB5AP5-201ENST00000549779 389 ntBASIC4.46□□□□□ -1.7
VPS33AQ96AX1 AC004217.3-201ENST00000551552 878 ntBASIC4.46□□□□□ -1.7
VPS33AQ96AX1 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.46□□□□□ -1.7
VPS33AQ96AX1 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.46□□□□□ -1.7
VPS33AQ96AX1 MIR3176-201ENST00000582210 90 ntBASIC4.46□□□□□ -1.7
VPS33AQ96AX1 VN1R87P-201ENST00000596706 487 ntBASIC4.46□□□□□ -1.7
VPS33AQ96AX1 AC010680.3-201ENST00000604215 520 ntBASIC4.46□□□□□ -1.7
VPS33AQ96AX1 BNIP3P31-201ENST00000604515 566 ntBASIC4.46□□□□□ -1.7
VPS33AQ96AX1 AC018645.2-201ENST00000609151 472 ntBASIC4.46□□□□□ -1.7
VPS33AQ96AX1 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.46□□□□□ -1.7
VPS33AQ96AX1 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VPS33AQ96AX1 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.46□□□□□ -1.7
VPS33AQ96AX1 BX649567.1-201ENST00000642071 1134 ntBASIC4.46□□□□□ -1.7
VPS33AQ96AX1 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VPS33AQ96AX1 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VPS33AQ96AX1 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.46□□□□□ -1.7
VPS33AQ96AX1 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
VPS33AQ96AX1 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VPS33AQ96AX1 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.46□□□□□ -1.7
VPS33AQ96AX1 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
VPS33AQ96AX1 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VPS33AQ96AX1 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VPS33AQ96AX1 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
VPS33AQ96AX1 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VPS33AQ96AX1 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
VPS33AQ96AX1 SGO1P1-201ENST00000603525 1447 ntBASIC4.46□□□□□ -1.7
VPS33AQ96AX1 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
VPS33AQ96AX1 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
VPS33AQ96AX1 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.45□□□□□ -1.7
VPS33AQ96AX1 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
VPS33AQ96AX1 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VPS33AQ96AX1 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
VPS33AQ96AX1 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.45□□□□□ -1.7
VPS33AQ96AX1 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
VPS33AQ96AX1 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
VPS33AQ96AX1 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.45□□□□□ -1.7
VPS33AQ96AX1 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
VPS33AQ96AX1 MIR16-1-201ENST00000385271 89 ntBASIC4.45□□□□□ -1.7
VPS33AQ96AX1 AC136624.1-201ENST00000400791 413 ntBASIC4.45□□□□□ -1.7
VPS33AQ96AX1 AL589647.1-201ENST00000402485 466 ntBASIC4.45□□□□□ -1.7
VPS33AQ96AX1 RN7SKP206-201ENST00000410823 293 ntBASIC4.45□□□□□ -1.7
VPS33AQ96AX1 AC114755.2-201ENST00000413520 361 ntBASIC4.45□□□□□ -1.7
VPS33AQ96AX1 TAF13P2-201ENST00000416876 286 ntBASIC4.45□□□□□ -1.7
VPS33AQ96AX1 AC234779.1-201ENST00000425910 285 ntBASIC4.45□□□□□ -1.7
VPS33AQ96AX1 UBE2V1P1-201ENST00000430836 445 ntBASIC4.45□□□□□ -1.7
VPS33AQ96AX1 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.45□□□□□ -1.7
VPS33AQ96AX1 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.45□□□□□ -1.7
VPS33AQ96AX1 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.45□□□□□ -1.7
VPS33AQ96AX1 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.45□□□□□ -1.7
VPS33AQ96AX1 RPS26P39-201ENST00000469206 341 ntBASIC4.45□□□□□ -1.7
VPS33AQ96AX1 PRDX3P4-201ENST00000470828 747 ntBASIC4.45□□□□□ -1.7
VPS33AQ96AX1 AP000893.1-201ENST00000474462 794 ntBASIC4.45□□□□□ -1.7
VPS33AQ96AX1 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.45□□□□□ -1.7
VPS33AQ96AX1 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.45□□□□□ -1.7
VPS33AQ96AX1 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.45□□□□□ -1.7
VPS33AQ96AX1 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VPS33AQ96AX1 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VPS33AQ96AX1 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VPS33AQ96AX1 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VPS33AQ96AX1 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VPS33AQ96AX1 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VPS33AQ96AX1 RN7SKP147-201ENST00000517154 244 ntBASIC4.45□□□□□ -1.7
VPS33AQ96AX1 RN7SKP234-201ENST00000517173 224 ntBASIC4.45□□□□□ -1.7
VPS33AQ96AX1 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.45□□□□□ -1.7
VPS33AQ96AX1 AC104115.2-201ENST00000523026 687 ntBASIC4.45□□□□□ -1.7
VPS33AQ96AX1 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
VPS33AQ96AX1 MTND2P26-201ENST00000528255 1029 ntBASIC4.45□□□□□ -1.7
VPS33AQ96AX1 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.45□□□□□ -1.7
VPS33AQ96AX1 GCSHP4-201ENST00000538792 439 ntBASIC4.45□□□□□ -1.7
VPS33AQ96AX1 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.45□□□□□ -1.7
VPS33AQ96AX1 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.45□□□□□ -1.7
VPS33AQ96AX1 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.45□□□□□ -1.7
VPS33AQ96AX1 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.45□□□□□ -1.7
VPS33AQ96AX1 AC008966.2-201ENST00000606157 453 ntBASIC4.45□□□□□ -1.7
VPS33AQ96AX1 FAM27B-201ENST00000610601 213 ntBASIC4.45□□□□□ -1.7
VPS33AQ96AX1 AC022467.1-201ENST00000614738 749 ntBASIC4.45□□□□□ -1.7
VPS33AQ96AX1 AL121873.1-201ENST00000616013 524 ntBASIC4.45□□□□□ -1.7
VPS33AQ96AX1 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VPS33AQ96AX1 AC067852.7-201ENST00000623270 535 ntBASIC4.45□□□□□ -1.7
VPS33AQ96AX1 AC010872.1-201ENST00000624225 675 ntBASIC4.45□□□□□ -1.7
VPS33AQ96AX1 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.45□□□□□ -1.7
VPS33AQ96AX1 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms