Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AL389915.2-201ENST00000454576 441 ntBASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 AC097484.1-201ENST00000471148 389 ntBASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 OR2AO1P-201ENST00000476497 403 ntBASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 RPL7P18-201ENST00000478965 734 ntBASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 AC091544.1-201ENST00000484702 348 ntBASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 AC072052.1-201ENST00000496556 306 ntBASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 UBE2NP1-201ENST00000545592 458 ntBASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 ISCA1P3-201ENST00000577104 373 ntBASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 AC010738.1-201ENST00000604970 987 ntBASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 AL512329.2-201ENST00000607350 548 ntBASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 MIR7973-1-201ENST00000614683 76 ntBASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 AC019206.1-201ENST00000621938 425 ntBASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 Z69908.1-201ENST00000622603 247 ntBASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 AC015804.1-201ENST00000622935 435 ntBASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 AP003497.2-201ENST00000624220 967 ntBASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 CASC19-222ENST00000641321 1173 ntBASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 RLIMP2-201ENST00000427891 1563 ntBASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 SGO1P1-201ENST00000603525 1447 ntBASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 RNA5SP455-201ENST00000365190 119 ntBASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 RPS3AP26-201ENST00000398259 784 ntBASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 AL359643.1-201ENST00000404109 423 ntBASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 MOB4-205ENST00000409916 829 ntTSL 3 BASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 RNA5SP80-201ENST00000410475 111 ntBASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 TBCAP2-201ENST00000416175 326 ntBASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 E2F6P2-201ENST00000420708 748 ntBASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 MRPS36P1-201ENST00000421291 307 ntBASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 DDX39BP1-205ENST00000422507 192 ntBASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 CHEK2P5-201ENST00000423877 246 ntBASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 DPRXP1-201ENST00000426312 460 ntBASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 AL031584.1-201ENST00000447169 754 ntBASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 BX284632.1-201ENST00000478218 541 ntBASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 COX6B1P5-201ENST00000509843 249 ntBASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 AC079395.1-201ENST00000510981 262 ntBASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 AC010587.2-201ENST00000511727 448 ntBASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 AC109445.1-201ENST00000512356 383 ntBASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 RPL7L1P4-201ENST00000513004 707 ntBASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 MTND5P13-201ENST00000513046 1079 ntBASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 RNA5SP392-201ENST00000516905 112 ntBASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 RN7SKP260-201ENST00000516907 149 ntBASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 AC068993.1-201ENST00000546724 589 ntBASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 AC023161.2-201ENST00000551218 780 ntBASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 NMNAT1P1-201ENST00000554095 876 ntBASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 AC009220.3-201ENST00000604318 586 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 158.7 ms