Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.89□□□□□ -1.63
SNED1Q8TER0 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SNED1Q8TER0 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.89□□□□□ -1.63
SNED1Q8TER0 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC4.89□□□□□ -1.63
SNED1Q8TER0 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC4.89□□□□□ -1.63
SNED1Q8TER0 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC4.89□□□□□ -1.63
SNED1Q8TER0 BNIP3P11-201ENST00000603878 563 ntBASIC4.89□□□□□ -1.63
SNED1Q8TER0 KATNBL1P1-201ENST00000605192 748 ntBASIC4.89□□□□□ -1.63
SNED1Q8TER0 AL451064.1-201ENST00000607718 471 ntBASIC4.89□□□□□ -1.63
SNED1Q8TER0 AC063944.3-201ENST00000609969 533 ntBASIC4.89□□□□□ -1.63
SNED1Q8TER0 AC064801.1-201ENST00000612025 407 ntBASIC4.89□□□□□ -1.63
SNED1Q8TER0 AL442067.2-201ENST00000614033 363 ntBASIC4.89□□□□□ -1.63
SNED1Q8TER0 AL158062.1-201ENST00000619632 745 ntBASIC4.89□□□□□ -1.63
SNED1Q8TER0 AC022960.3-201ENST00000619794 441 ntBASIC4.89□□□□□ -1.63
SNED1Q8TER0 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC4.89□□□□□ -1.63
SNED1Q8TER0 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.89□□□□□ -1.63
SNED1Q8TER0 LINC00561-201ENST00000565815 2738 ntBASIC4.89□□□□□ -1.63
SNED1Q8TER0 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SNED1Q8TER0 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SNED1Q8TER0 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SNED1Q8TER0 SMG1P4-204ENST00000523028 4131 ntBASIC4.89□□□□□ -1.63
SNED1Q8TER0 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SNED1Q8TER0 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SNED1Q8TER0 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SNED1Q8TER0 THAP12P8-201ENST00000447914 2115 ntBASIC4.89□□□□□ -1.63
SNED1Q8TER0 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
SNED1Q8TER0 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
SNED1Q8TER0 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
SNED1Q8TER0 MIR34B-201ENST00000385076 84 ntBASIC4.89□□□□□ -1.63
SNED1Q8TER0 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SNED1Q8TER0 AC233289.1-201ENST00000403700 508 ntBASIC4.89□□□□□ -1.63
SNED1Q8TER0 AC098592.2-201ENST00000413158 265 ntBASIC4.89□□□□□ -1.63
SNED1Q8TER0 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
SNED1Q8TER0 TRIM60P17-201ENST00000415181 719 ntBASIC4.89□□□□□ -1.63
SNED1Q8TER0 AL139247.1-201ENST00000422768 325 ntBASIC4.89□□□□□ -1.63
SNED1Q8TER0 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC4.89□□□□□ -1.63
SNED1Q8TER0 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.89□□□□□ -1.63
SNED1Q8TER0 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.89□□□□□ -1.63
SNED1Q8TER0 AC083863.1-201ENST00000438811 231 ntBASIC4.89□□□□□ -1.63
SNED1Q8TER0 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.89□□□□□ -1.63
SNED1Q8TER0 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.89□□□□□ -1.63
SNED1Q8TER0 RNU7-143P-201ENST00000516781 65 ntBASIC4.89□□□□□ -1.63
SNED1Q8TER0 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC4.89□□□□□ -1.63
SNED1Q8TER0 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.89□□□□□ -1.63
SNED1Q8TER0 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.89□□□□□ -1.63
SNED1Q8TER0 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.89□□□□□ -1.63
SNED1Q8TER0 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.89□□□□□ -1.63
SNED1Q8TER0 MIR3922-201ENST00000585192 84 ntBASIC4.89□□□□□ -1.63
SNED1Q8TER0 AC008507.2-201ENST00000588402 1176 ntBASIC4.89□□□□□ -1.63
SNED1Q8TER0 AC245128.3-201ENST00000594721 748 ntBASIC4.89□□□□□ -1.63
SNED1Q8TER0 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.89□□□□□ -1.63
SNED1Q8TER0 AC138627.1-204ENST00000641894 765 ntBASIC4.89□□□□□ -1.63
SNED1Q8TER0 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SNED1Q8TER0 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
SNED1Q8TER0 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SNED1Q8TER0 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.88□□□□□ -1.63
SNED1Q8TER0 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SNED1Q8TER0 AC107021.2-201ENST00000567714 2095 ntBASIC4.88□□□□□ -1.63
SNED1Q8TER0 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SNED1Q8TER0 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
SNED1Q8TER0 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SNED1Q8TER0 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SNED1Q8TER0 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.88□□□□□ -1.63
SNED1Q8TER0 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.88□□□□□ -1.63
SNED1Q8TER0 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.88□□□□□ -1.63
SNED1Q8TER0 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SNED1Q8TER0 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
SNED1Q8TER0 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SNED1Q8TER0 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.88□□□□□ -1.63
SNED1Q8TER0 AC073346.2-201ENST00000624724 2058 ntBASIC4.88□□□□□ -1.63
SNED1Q8TER0 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SNED1Q8TER0 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SNED1Q8TER0 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.88□□□□□ -1.63
SNED1Q8TER0 VN1R31P-201ENST00000417498 730 ntBASIC4.88□□□□□ -1.63
SNED1Q8TER0 AL354692.1-201ENST00000423044 315 ntBASIC4.88□□□□□ -1.63
SNED1Q8TER0 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC4.88□□□□□ -1.63
SNED1Q8TER0 AL390879.2-203ENST00000426943 1121 ntBASIC4.88□□□□□ -1.63
SNED1Q8TER0 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.88□□□□□ -1.63
SNED1Q8TER0 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC4.88□□□□□ -1.63
SNED1Q8TER0 RPL5P16-201ENST00000471467 790 ntBASIC4.88□□□□□ -1.63
SNED1Q8TER0 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SNED1Q8TER0 RPL29P14-201ENST00000495837 428 ntBASIC4.88□□□□□ -1.63
SNED1Q8TER0 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.88□□□□□ -1.63
SNED1Q8TER0 RNU4-18P-201ENST00000516751 149 ntBASIC4.88□□□□□ -1.63
SNED1Q8TER0 RNA5SP179-201ENST00000517284 121 ntBASIC4.88□□□□□ -1.63
SNED1Q8TER0 AC008694.2-201ENST00000517591 306 ntBASIC4.88□□□□□ -1.63
SNED1Q8TER0 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.88□□□□□ -1.63
SNED1Q8TER0 IGLV3-26-201ENST00000520756 302 ntBASIC4.88□□□□□ -1.63
SNED1Q8TER0 PHBP17-201ENST00000528576 541 ntBASIC4.88□□□□□ -1.63
SNED1Q8TER0 AC093591.2-201ENST00000565254 3843 ntBASIC4.88□□□□□ -1.63
SNED1Q8TER0 SNX6P1-201ENST00000601728 1224 ntBASIC4.88□□□□□ -1.63
SNED1Q8TER0 AC091167.4-201ENST00000605079 184 ntBASIC4.88□□□□□ -1.63
SNED1Q8TER0 MIR7975-201ENST00000619350 68 ntBASIC4.88□□□□□ -1.63
SNED1Q8TER0 AF001550.2-201ENST00000636643 217 ntBASIC4.88□□□□□ -1.63
SNED1Q8TER0 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SNED1Q8TER0 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
SNED1Q8TER0 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
SNED1Q8TER0 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SNED1Q8TER0 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC4.87□□□□□ -1.63
SNED1Q8TER0 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms