Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 AL713922.2-201ENST00000619384 716 ntBASIC3.24□□□□□ -1.89
CCDC168Q8NDH2 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC168Q8NDH2 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC168Q8NDH2 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC168Q8NDH2 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC168Q8NDH2 AL672167.1-204ENST00000641875 3017 ntBASIC3.24□□□□□ -1.89
CCDC168Q8NDH2 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC168Q8NDH2 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CCDC168Q8NDH2 UBE2V1P2-201ENST00000397758 440 ntBASIC3.24□□□□□ -1.89
CCDC168Q8NDH2 AC005326.1-201ENST00000429197 123 ntBASIC3.24□□□□□ -1.89
CCDC168Q8NDH2 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC168Q8NDH2 NANOGNBP1-201ENST00000448444 480 ntBASIC3.24□□□□□ -1.89
CCDC168Q8NDH2 DNAJC19P8-201ENST00000452887 259 ntBASIC3.24□□□□□ -1.89
CCDC168Q8NDH2 MYL12BP2-201ENST00000503948 512 ntBASIC3.24□□□□□ -1.89
CCDC168Q8NDH2 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC168Q8NDH2 AC010285.3-201ENST00000511668 676 ntBASIC3.24□□□□□ -1.89
CCDC168Q8NDH2 RNA5SP303-201ENST00000516192 130 ntBASIC3.24□□□□□ -1.89
CCDC168Q8NDH2 CYCSP28-201ENST00000534284 321 ntBASIC3.24□□□□□ -1.89
CCDC168Q8NDH2 AC027176.2-201ENST00000559166 746 ntBASIC3.24□□□□□ -1.89
CCDC168Q8NDH2 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.24□□□□□ -1.89
CCDC168Q8NDH2 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC168Q8NDH2 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
CCDC168Q8NDH2 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
CCDC168Q8NDH2 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC168Q8NDH2 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.23□□□□□ -1.89
CCDC168Q8NDH2 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
CCDC168Q8NDH2 ZNF826P-207ENST00000622273 1910 ntBASIC3.23□□□□□ -1.89
CCDC168Q8NDH2 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CCDC168Q8NDH2 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.23□□□□□ -1.89
CCDC168Q8NDH2 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC168Q8NDH2 OR10J6P-201ENST00000289731 930 ntBASIC3.23□□□□□ -1.89
CCDC168Q8NDH2 SNORD35B-201ENST00000363660 87 ntBASIC3.23□□□□□ -1.89
CCDC168Q8NDH2 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.23□□□□□ -1.89
CCDC168Q8NDH2 SNORA48.5-201ENST00000391143 135 ntBASIC3.23□□□□□ -1.89
CCDC168Q8NDH2 TAF9BP1-201ENST00000396646 746 ntBASIC3.23□□□□□ -1.89
CCDC168Q8NDH2 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.23□□□□□ -1.89
CCDC168Q8NDH2 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.23□□□□□ -1.89
CCDC168Q8NDH2 AC132942.1-201ENST00000486753 483 ntBASIC3.23□□□□□ -1.89
CCDC168Q8NDH2 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC3.23□□□□□ -1.89
CCDC168Q8NDH2 COX6B1P6-201ENST00000522347 255 ntBASIC3.23□□□□□ -1.89
CCDC168Q8NDH2 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC168Q8NDH2 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC168Q8NDH2 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC168Q8NDH2 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC168Q8NDH2 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.23□□□□□ -1.89
CCDC168Q8NDH2 AL512643.1-201ENST00000635735 524 ntBASIC3.23□□□□□ -1.89
CCDC168Q8NDH2 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC168Q8NDH2 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC168Q8NDH2 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC168Q8NDH2 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC168Q8NDH2 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC168Q8NDH2 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC168Q8NDH2 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC168Q8NDH2 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC168Q8NDH2 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC168Q8NDH2 DPY19L1P2-201ENST00000426647 915 ntBASIC3.22□□□□□ -1.89
CCDC168Q8NDH2 Z74696.2-201ENST00000436514 498 ntBASIC3.22□□□□□ -1.89
CCDC168Q8NDH2 RBMY2UP-201ENST00000453474 324 ntBASIC3.22□□□□□ -1.89
CCDC168Q8NDH2 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.22□□□□□ -1.89
CCDC168Q8NDH2 RPL32P34-201ENST00000486380 400 ntBASIC3.22□□□□□ -1.89
CCDC168Q8NDH2 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.22□□□□□ -1.89
CCDC168Q8NDH2 RNA5SP164-201ENST00000516533 110 ntBASIC3.22□□□□□ -1.89
CCDC168Q8NDH2 OR7E13P-201ENST00000526052 910 ntBASIC3.22□□□□□ -1.89
CCDC168Q8NDH2 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC168Q8NDH2 MIR3945-201ENST00000581853 98 ntBASIC3.22□□□□□ -1.89
CCDC168Q8NDH2 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
CCDC168Q8NDH2 RNU1-30P-201ENST00000606575 163 ntBASIC3.22□□□□□ -1.89
CCDC168Q8NDH2 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC168Q8NDH2 ATE1-AS1-202ENST00000636460 506 ntBASIC3.22□□□□□ -1.89
CCDC168Q8NDH2 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC168Q8NDH2 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CCDC168Q8NDH2 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.22□□□□□ -1.89
CCDC168Q8NDH2 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC168Q8NDH2 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC168Q8NDH2 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC168Q8NDH2 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC168Q8NDH2 MIR1911-201ENST00000410783 80 ntBASIC3.22□□□□□ -1.89
CCDC168Q8NDH2 RPL23AP69-201ENST00000431134 458 ntBASIC3.22□□□□□ -1.89
CCDC168Q8NDH2 RPL21P10-201ENST00000463521 490 ntBASIC3.22□□□□□ -1.89
CCDC168Q8NDH2 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC168Q8NDH2 BANCR-201ENST00000624238 473 ntTSL 2 BASIC3.22□□□□□ -1.89
CCDC168Q8NDH2 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC3.22□□□□□ -1.89
CCDC168Q8NDH2 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC3.22□□□□□ -1.89
CCDC168Q8NDH2 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC168Q8NDH2 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.22□□□□□ -1.89
CCDC168Q8NDH2 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC168Q8NDH2 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC168Q8NDH2 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.89
CCDC168Q8NDH2 UBA52P6-201ENST00000399822 382 ntBASIC3.21□□□□□ -1.89
CCDC168Q8NDH2 AL078604.1-201ENST00000404609 466 ntBASIC3.21□□□□□ -1.89
CCDC168Q8NDH2 RN7SKP222-201ENST00000410651 315 ntBASIC3.21□□□□□ -1.89
CCDC168Q8NDH2 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.21□□□□□ -1.89
CCDC168Q8NDH2 AL121878.1-201ENST00000418638 859 ntBASIC3.21□□□□□ -1.89
CCDC168Q8NDH2 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.21□□□□□ -1.89
CCDC168Q8NDH2 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC3.21□□□□□ -1.89
CCDC168Q8NDH2 AC022695.1-201ENST00000522089 237 ntBASIC3.21□□□□□ -1.89
CCDC168Q8NDH2 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.21□□□□□ -1.89
CCDC168Q8NDH2 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.21□□□□□ -1.89
CCDC168Q8NDH2 CR383656.14-201ENST00000551951 406 ntBASIC3.21□□□□□ -1.89
CCDC168Q8NDH2 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC3.21□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms