Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC012409.3-201ENST00000611343 981 ntBASIC5.54□□□□□ -1.52
TRIM48Q8IWZ4 RNA5SP439-201ENST00000617595 124 ntBASIC5.54□□□□□ -1.52
TRIM48Q8IWZ4 AL121890.2-201ENST00000617644 465 ntBASIC5.54□□□□□ -1.52
TRIM48Q8IWZ4 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC5.54□□□□□ -1.52
TRIM48Q8IWZ4 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.54□□□□□ -1.52
TRIM48Q8IWZ4 AL356321.1-201ENST00000621360 228 ntBASIC5.54□□□□□ -1.52
TRIM48Q8IWZ4 AC063952.1-203ENST00000634410 658 ntBASIC5.54□□□□□ -1.52
TRIM48Q8IWZ4 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.54□□□□□ -1.52
TRIM48Q8IWZ4 AC068870.3-201ENST00000625077 2536 ntBASIC5.54□□□□□ -1.52
TRIM48Q8IWZ4 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.54□□□□□ -1.52
TRIM48Q8IWZ4 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC5.54□□□□□ -1.52
TRIM48Q8IWZ4 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.54□□□□□ -1.52
TRIM48Q8IWZ4 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.54□□□□□ -1.52
TRIM48Q8IWZ4 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM48Q8IWZ4 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM48Q8IWZ4 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM48Q8IWZ4 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
TRIM48Q8IWZ4 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM48Q8IWZ4 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 MFSD8-239ENST00000641590 2479 ntBASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 LINC02019-201ENST00000608605 2060 ntBASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 Y_RNA.25-201ENST00000362528 102 ntBASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 RNU4-12P-201ENST00000365233 139 ntBASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 U3.23-201ENST00000391132 200 ntBASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 OR3A2-201ENST00000408891 1076 ntBASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 RNU6-272P-201ENST00000411028 104 ntBASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 HMGN1P14-201ENST00000412459 517 ntBASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 VDAC1P6-201ENST00000430062 855 ntBASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 RPL31P58-201ENST00000469001 379 ntBASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 AL161747.1-201ENST00000480068 358 ntBASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 AC092989.1-201ENST00000481235 277 ntBASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 AC124947.2-202ENST00000552735 133 ntBASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 AC091489.2-201ENST00000566263 604 ntBASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 MRPS21P7-201ENST00000566937 238 ntBASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 AP000860.1-201ENST00000605250 559 ntBASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 AC103710.4-201ENST00000609301 899 ntBASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 AC017083.3-201ENST00000609955 700 ntBASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 AP000894.4-201ENST00000610185 483 ntBASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 uc_338.9-201ENST00000617424 182 ntBASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 CU639417.4-201ENST00000623928 207 ntBASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 CR381653.2-201ENST00000624041 768 ntBASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 CASC19-264ENST00000641912 1184 ntBASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 AC130360.2-201ENST00000533477 1556 ntBASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 ASNSP1-204ENST00000641977 1664 ntBASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 DDX18P4-201ENST00000511690 1966 ntBASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM48Q8IWZ4 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 MIR133A2-201ENST00000347538 102 ntBASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 RNU5E-5P-201ENST00000365379 116 ntBASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 RNA5SP30-201ENST00000365552 115 ntBASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 CUBN-201ENST00000377823 705 ntTSL 3 BASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 RNU6-1122P-201ENST00000384449 107 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms