Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.97□□□□□ -1.61
SCN4BQ8IWT1 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.97□□□□□ -1.61
SCN4BQ8IWT1 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.97□□□□□ -1.61
SCN4BQ8IWT1 GSTP1P1-201ENST00000548078 319 ntBASIC4.97□□□□□ -1.61
SCN4BQ8IWT1 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SCN4BQ8IWT1 AL359219.2-201ENST00000555184 348 ntBASIC4.97□□□□□ -1.61
SCN4BQ8IWT1 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SCN4BQ8IWT1 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.97□□□□□ -1.61
SCN4BQ8IWT1 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.97□□□□□ -1.61
SCN4BQ8IWT1 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.97□□□□□ -1.61
SCN4BQ8IWT1 RN7SL690P-201ENST00000582087 240 ntBASIC4.97□□□□□ -1.61
SCN4BQ8IWT1 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.97□□□□□ -1.61
SCN4BQ8IWT1 BNIP3P4-201ENST00000604946 565 ntBASIC4.97□□□□□ -1.61
SCN4BQ8IWT1 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
SCN4BQ8IWT1 AL138478.1-201ENST00000612252 832 ntBASIC4.97□□□□□ -1.61
SCN4BQ8IWT1 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SCN4BQ8IWT1 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.97□□□□□ -1.61
SCN4BQ8IWT1 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.97□□□□□ -1.61
SCN4BQ8IWT1 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
SCN4BQ8IWT1 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.97□□□□□ -1.61
SCN4BQ8IWT1 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
SCN4BQ8IWT1 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
SCN4BQ8IWT1 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
SCN4BQ8IWT1 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
SCN4BQ8IWT1 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.97□□□□□ -1.61
SCN4BQ8IWT1 MTND4P31-201ENST00000425607 1343 ntBASIC4.97□□□□□ -1.61
SCN4BQ8IWT1 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.97□□□□□ -1.61
SCN4BQ8IWT1 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.96□□□□□ -1.61
SCN4BQ8IWT1 MFSD8-216ENST00000641147 4009 ntBASIC4.96□□□□□ -1.61
SCN4BQ8IWT1 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
SCN4BQ8IWT1 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 AC011755.1-201ENST00000623763 2049 ntBASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 RNU1-87P-201ENST00000363727 170 ntBASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 Y_RNA.472-201ENST00000384322 102 ntBASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 RNU6-636P-201ENST00000384598 107 ntBASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 AL512430.2-201ENST00000406786 339 ntBASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 AL513175.2-201ENST00000422071 443 ntBASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 AC009480.2-201ENST00000422916 432 ntBASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 PTMAP3-201ENST00000447474 330 ntBASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 MTND1P31-201ENST00000449206 961 ntBASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 TPMTP4-201ENST00000450749 678 ntBASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 snoU13.1-201ENST00000459157 104 ntBASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 MTCO2P6-201ENST00000463134 685 ntBASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 RNA5SP249-201ENST00000516127 99 ntBASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 snoZ278.1-201ENST00000517059 112 ntBASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 MTND2P38-201ENST00000522536 667 ntBASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 SMARCE1P4-201ENST00000523647 241 ntBASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 MTCO3P15-201ENST00000526563 574 ntBASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 FKBP1BP1-201ENST00000553366 325 ntBASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 AC209154.1-201ENST00000582156 337 ntBASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 AP001542.2-201ENST00000593141 364 ntBASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 AC245036.5-201ENST00000596330 847 ntBASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 AC093765.1-201ENST00000603758 881 ntBASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 Z99289.3-201ENST00000605586 594 ntBASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 AC017104.5-201ENST00000637647 639 ntBASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 AL451142.2-201ENST00000429076 2090 ntBASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 AC010300.1-201ENST00000600671 5134 ntBASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
SCN4BQ8IWT1 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.95□□□□□ -1.62
SCN4BQ8IWT1 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
SCN4BQ8IWT1 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
SCN4BQ8IWT1 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
SCN4BQ8IWT1 OR4K15-201ENST00000305051 1216 ntBASIC4.95□□□□□ -1.62
SCN4BQ8IWT1 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
SCN4BQ8IWT1 RNU1-32P-201ENST00000363937 159 ntBASIC4.95□□□□□ -1.62
SCN4BQ8IWT1 SNORD113.2-201ENST00000364166 89 ntBASIC4.95□□□□□ -1.62
SCN4BQ8IWT1 RNU4-28P-201ENST00000364739 141 ntBASIC4.95□□□□□ -1.62
SCN4BQ8IWT1 SNORA71.2-201ENST00000364941 134 ntBASIC4.95□□□□□ -1.62
SCN4BQ8IWT1 SNORA70F-201ENST00000384142 135 ntBASIC4.95□□□□□ -1.62
SCN4BQ8IWT1 MIR141-201ENST00000384975 95 ntBASIC4.95□□□□□ -1.62
SCN4BQ8IWT1 AL590762.2-201ENST00000395798 571 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms