Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.77□□□□□ -1.65
PRPF39Q86UA1 MTCO3P27-201ENST00000514397 196 ntBASIC4.77□□□□□ -1.65
PRPF39Q86UA1 RNU2-30P-201ENST00000516209 141 ntBASIC4.77□□□□□ -1.65
PRPF39Q86UA1 AC090819.1-201ENST00000523800 1111 ntBASIC4.77□□□□□ -1.65
PRPF39Q86UA1 RPL21P7-201ENST00000557463 483 ntBASIC4.77□□□□□ -1.65
PRPF39Q86UA1 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.77□□□□□ -1.65
PRPF39Q86UA1 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.77□□□□□ -1.65
PRPF39Q86UA1 MIR3908-201ENST00000579798 126 ntBASIC4.77□□□□□ -1.65
PRPF39Q86UA1 MIR5096-201ENST00000583713 70 ntBASIC4.77□□□□□ -1.65
PRPF39Q86UA1 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.77□□□□□ -1.65
PRPF39Q86UA1 AC026979.4-201ENST00000606555 645 ntBASIC4.77□□□□□ -1.65
PRPF39Q86UA1 AC016542.1-201ENST00000608259 493 ntBASIC4.77□□□□□ -1.65
PRPF39Q86UA1 AC253576.2-201ENST00000618815 580 ntBASIC4.77□□□□□ -1.65
PRPF39Q86UA1 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PRPF39Q86UA1 AC000123.2-201ENST00000623124 461 ntBASIC4.77□□□□□ -1.65
PRPF39Q86UA1 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.77□□□□□ -1.65
PRPF39Q86UA1 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.77□□□□□ -1.65
PRPF39Q86UA1 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PRPF39Q86UA1 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PRPF39Q86UA1 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.77□□□□□ -1.65
PRPF39Q86UA1 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
PRPF39Q86UA1 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PRPF39Q86UA1 ZNF849P-201ENST00000594711 1566 ntBASIC4.77□□□□□ -1.65
PRPF39Q86UA1 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PRPF39Q86UA1 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
PRPF39Q86UA1 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PRPF39Q86UA1 Z98755.1-201ENST00000407015 1384 ntBASIC4.77□□□□□ -1.65
PRPF39Q86UA1 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
PRPF39Q86UA1 KARSP3-201ENST00000571212 1504 ntBASIC4.77□□□□□ -1.65
PRPF39Q86UA1 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.77□□□□□ -1.65
PRPF39Q86UA1 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.76□□□□□ -1.65
PRPF39Q86UA1 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PRPF39Q86UA1 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
PRPF39Q86UA1 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.76□□□□□ -1.65
PRPF39Q86UA1 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PRPF39Q86UA1 OR4K17-201ENST00000315543 1032 ntBASIC4.76□□□□□ -1.65
PRPF39Q86UA1 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
PRPF39Q86UA1 RNU1-87P-201ENST00000363727 170 ntBASIC4.76□□□□□ -1.65
PRPF39Q86UA1 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.76□□□□□ -1.65
PRPF39Q86UA1 AL049697.2-201ENST00000403708 294 ntBASIC4.76□□□□□ -1.65
PRPF39Q86UA1 HMGB3P19-201ENST00000403971 560 ntBASIC4.76□□□□□ -1.65
PRPF39Q86UA1 AL591848.1-201ENST00000413092 322 ntBASIC4.76□□□□□ -1.65
PRPF39Q86UA1 AC004022.2-201ENST00000413824 193 ntBASIC4.76□□□□□ -1.65
PRPF39Q86UA1 Z74021.1-201ENST00000423610 407 ntBASIC4.76□□□□□ -1.65
PRPF39Q86UA1 FO393414.1-201ENST00000428697 1184 ntBASIC4.76□□□□□ -1.65
PRPF39Q86UA1 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.76□□□□□ -1.65
PRPF39Q86UA1 FABP5P3-201ENST00000437960 408 ntBASIC4.76□□□□□ -1.65
PRPF39Q86UA1 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.76□□□□□ -1.65
PRPF39Q86UA1 HMGB1P48-201ENST00000446155 598 ntBASIC4.76□□□□□ -1.65
PRPF39Q86UA1 AC005002.1-201ENST00000447458 540 ntBASIC4.76□□□□□ -1.65
PRPF39Q86UA1 TPT1P12-201ENST00000448968 492 ntBASIC4.76□□□□□ -1.65
PRPF39Q86UA1 NIP7P2-201ENST00000485801 544 ntBASIC4.76□□□□□ -1.65
PRPF39Q86UA1 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.76□□□□□ -1.65
PRPF39Q86UA1 AC110792.2-201ENST00000510278 224 ntBASIC4.76□□□□□ -1.65
PRPF39Q86UA1 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.76□□□□□ -1.65
PRPF39Q86UA1 AC112206.4-201ENST00000515142 405 ntBASIC4.76□□□□□ -1.65
PRPF39Q86UA1 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.76□□□□□ -1.65
PRPF39Q86UA1 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC4.76□□□□□ -1.65
PRPF39Q86UA1 OR5M2P-201ENST00000529003 936 ntBASIC4.76□□□□□ -1.65
PRPF39Q86UA1 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.76□□□□□ -1.65
PRPF39Q86UA1 AL110118.1-201ENST00000553543 400 ntBASIC4.76□□□□□ -1.65
PRPF39Q86UA1 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.76□□□□□ -1.65
PRPF39Q86UA1 RN7SL652P-201ENST00000577769 300 ntBASIC4.76□□□□□ -1.65
PRPF39Q86UA1 MIR4697-201ENST00000582977 78 ntBASIC4.76□□□□□ -1.65
PRPF39Q86UA1 RPL26P30-202ENST00000602923 645 ntBASIC4.76□□□□□ -1.65
PRPF39Q86UA1 AP002906.1-201ENST00000603405 233 ntBASIC4.76□□□□□ -1.65
PRPF39Q86UA1 BNIP3P4-201ENST00000604946 565 ntBASIC4.76□□□□□ -1.65
PRPF39Q86UA1 AL392112.1-201ENST00000605115 829 ntBASIC4.76□□□□□ -1.65
PRPF39Q86UA1 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.76□□□□□ -1.65
PRPF39Q86UA1 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.76□□□□□ -1.65
PRPF39Q86UA1 AC140113.4-201ENST00000622087 222 ntBASIC4.76□□□□□ -1.65
PRPF39Q86UA1 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.76□□□□□ -1.65
PRPF39Q86UA1 AL590396.4-201ENST00000636779 956 ntBASIC4.76□□□□□ -1.65
PRPF39Q86UA1 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
PRPF39Q86UA1 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PRPF39Q86UA1 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
PRPF39Q86UA1 NSRP1P1-201ENST00000444067 1693 ntBASIC4.76□□□□□ -1.65
PRPF39Q86UA1 ASNSP1-204ENST00000641977 1664 ntBASIC4.76□□□□□ -1.65
PRPF39Q86UA1 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
PRPF39Q86UA1 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PRPF39Q86UA1 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.76□□□□□ -1.65
PRPF39Q86UA1 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
PRPF39Q86UA1 AC000123.3-201ENST00000624029 4975 ntBASIC4.75□□□□□ -1.65
PRPF39Q86UA1 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.75□□□□□ -1.65
PRPF39Q86UA1 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PRPF39Q86UA1 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PRPF39Q86UA1 OR56B2P-201ENST00000317102 954 ntBASIC4.75□□□□□ -1.65
PRPF39Q86UA1 SNORD113.2-201ENST00000364166 89 ntBASIC4.75□□□□□ -1.65
PRPF39Q86UA1 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.75□□□□□ -1.65
PRPF39Q86UA1 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PRPF39Q86UA1 SNORA70F-201ENST00000384142 135 ntBASIC4.75□□□□□ -1.65
PRPF39Q86UA1 SNORD65C-201ENST00000390962 71 ntBASIC4.75□□□□□ -1.65
PRPF39Q86UA1 RPL22P22-201ENST00000395439 379 ntBASIC4.75□□□□□ -1.65
PRPF39Q86UA1 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC4.75□□□□□ -1.65
PRPF39Q86UA1 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.75□□□□□ -1.65
PRPF39Q86UA1 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.75□□□□□ -1.65
PRPF39Q86UA1 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.75□□□□□ -1.65
PRPF39Q86UA1 RPL21P110-201ENST00000433345 446 ntBASIC4.75□□□□□ -1.65
PRPF39Q86UA1 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.75□□□□□ -1.65
PRPF39Q86UA1 AC002542.1-201ENST00000440683 193 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 186 ms