Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 CEACAMP9-201ENST00000442990 513 ntBASIC5.06□□□□□ -1.6
RNF220Q5VTB9 AL450996.1-201ENST00000445574 1202 ntBASIC5.06□□□□□ -1.6
RNF220Q5VTB9 PTMAP3-201ENST00000447474 330 ntBASIC5.06□□□□□ -1.6
RNF220Q5VTB9 AL450023.1-201ENST00000450868 751 ntBASIC5.06□□□□□ -1.6
RNF220Q5VTB9 RPL18AP17-201ENST00000455326 198 ntBASIC5.06□□□□□ -1.6
RNF220Q5VTB9 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 AC022795.1-201ENST00000473808 480 ntBASIC5.06□□□□□ -1.6
RNF220Q5VTB9 RPS3AP43-201ENST00000479743 781 ntBASIC5.06□□□□□ -1.6
RNF220Q5VTB9 RN7SL741P-201ENST00000482473 289 ntBASIC5.06□□□□□ -1.6
RNF220Q5VTB9 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 OR4G11P-201ENST00000492842 939 ntBASIC5.06□□□□□ -1.6
RNF220Q5VTB9 AC005726.1-201ENST00000494679 427 ntBASIC5.06□□□□□ -1.6
RNF220Q5VTB9 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 AC117522.2-201ENST00000510049 657 ntBASIC5.06□□□□□ -1.6
RNF220Q5VTB9 AC093281.2-201ENST00000510153 597 ntBASIC5.06□□□□□ -1.6
RNF220Q5VTB9 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 LSM6P2-201ENST00000552208 177 ntBASIC5.06□□□□□ -1.6
RNF220Q5VTB9 AL389895.1-201ENST00000554127 252 ntBASIC5.06□□□□□ -1.6
RNF220Q5VTB9 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 AC084757.1-201ENST00000559987 490 ntBASIC5.06□□□□□ -1.6
RNF220Q5VTB9 AGGF1P8-201ENST00000562979 1000 ntBASIC5.06□□□□□ -1.6
RNF220Q5VTB9 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 RN7SL52P-201ENST00000584271 284 ntBASIC5.06□□□□□ -1.6
RNF220Q5VTB9 VN1R90P-201ENST00000595717 726 ntBASIC5.06□□□□□ -1.6
RNF220Q5VTB9 AC010620.1-201ENST00000601088 1102 ntBASIC5.06□□□□□ -1.6
RNF220Q5VTB9 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 AC027243.2-201ENST00000602530 724 ntBASIC5.06□□□□□ -1.6
RNF220Q5VTB9 AC004987.4-201ENST00000603383 338 ntBASIC5.06□□□□□ -1.6
RNF220Q5VTB9 RN7SL787P-201ENST00000613000 284 ntBASIC5.06□□□□□ -1.6
RNF220Q5VTB9 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC5.06□□□□□ -1.6
RNF220Q5VTB9 AC135068.5-201ENST00000624197 983 ntBASIC5.06□□□□□ -1.6
RNF220Q5VTB9 AC092184.1-201ENST00000625042 715 ntBASIC5.06□□□□□ -1.6
RNF220Q5VTB9 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 SAGE2P-201ENST00000420011 2126 ntBASIC5.06□□□□□ -1.6
RNF220Q5VTB9 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 AL672167.1-205ENST00000641112 3080 ntBASIC5.05□□□□□ -1.6
RNF220Q5VTB9 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RNF220Q5VTB9 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RNF220Q5VTB9 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RNF220Q5VTB9 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RNF220Q5VTB9 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RNF220Q5VTB9 OR5BR1P-201ENST00000524992 1330 ntBASIC5.05□□□□□ -1.6
RNF220Q5VTB9 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RNF220Q5VTB9 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
RNF220Q5VTB9 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
RNF220Q5VTB9 RNU6-984P-201ENST00000363236 109 ntBASIC5.05□□□□□ -1.6
RNF220Q5VTB9 RNU6-253P-201ENST00000384730 105 ntBASIC5.05□□□□□ -1.6
RNF220Q5VTB9 ATP5F1P4-201ENST00000397288 746 ntBASIC5.05□□□□□ -1.6
RNF220Q5VTB9 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RNF220Q5VTB9 SKINT1L-201ENST00000401057 817 ntBASIC5.05□□□□□ -1.6
RNF220Q5VTB9 RNU2-21P-201ENST00000410368 188 ntBASIC5.05□□□□□ -1.6
RNF220Q5VTB9 AC073264.1-201ENST00000411508 416 ntBASIC5.05□□□□□ -1.6
RNF220Q5VTB9 AL133384.1-201ENST00000412744 351 ntBASIC5.05□□□□□ -1.6
RNF220Q5VTB9 RPL34P3-201ENST00000421454 338 ntBASIC5.05□□□□□ -1.6
RNF220Q5VTB9 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.05□□□□□ -1.6
RNF220Q5VTB9 AL390023.1-201ENST00000428836 262 ntBASIC5.05□□□□□ -1.6
RNF220Q5VTB9 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.05□□□□□ -1.6
RNF220Q5VTB9 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.05□□□□□ -1.6
RNF220Q5VTB9 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.05□□□□□ -1.6
RNF220Q5VTB9 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.05□□□□□ -1.6
RNF220Q5VTB9 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.05□□□□□ -1.6
RNF220Q5VTB9 RPL15P21-201ENST00000495592 567 ntBASIC5.05□□□□□ -1.6
RNF220Q5VTB9 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC5.05□□□□□ -1.6
RNF220Q5VTB9 AC090071.1-201ENST00000507713 644 ntBASIC5.05□□□□□ -1.6
RNF220Q5VTB9 AC111000.2-201ENST00000507775 550 ntBASIC5.05□□□□□ -1.6
RNF220Q5VTB9 ATP1B1P1-201ENST00000509767 915 ntBASIC5.05□□□□□ -1.6
RNF220Q5VTB9 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC5.05□□□□□ -1.6
RNF220Q5VTB9 RN7SKP46-201ENST00000515942 234 ntBASIC5.05□□□□□ -1.6
RNF220Q5VTB9 SNORD116-26-201ENST00000516006 96 ntBASIC5.05□□□□□ -1.6
RNF220Q5VTB9 RNU6-583P-201ENST00000516012 92 ntBASIC5.05□□□□□ -1.6
RNF220Q5VTB9 RNY4P37-201ENST00000516225 96 ntBASIC5.05□□□□□ -1.6
RNF220Q5VTB9 RN7SKP82-201ENST00000516786 223 ntBASIC5.05□□□□□ -1.6
RNF220Q5VTB9 RNU6-678P-201ENST00000516832 109 ntBASIC5.05□□□□□ -1.6
RNF220Q5VTB9 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 136.4 ms