Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 OR5D2P-201ENST00000524390 911 ntBASIC7.58□□□□□ -1.2
RC3H1Q5TC82 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RC3H1Q5TC82 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC7.58□□□□□ -1.2
RC3H1Q5TC82 DPPA3P3-201ENST00000603842 430 ntBASIC7.58□□□□□ -1.2
RC3H1Q5TC82 AL080274.1-201ENST00000605565 220 ntBASIC7.58□□□□□ -1.2
RC3H1Q5TC82 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC7.58□□□□□ -1.2
RC3H1Q5TC82 DISC2.1-201ENST00000612827 205 ntBASIC7.58□□□□□ -1.2
RC3H1Q5TC82 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC7.58□□□□□ -1.2
RC3H1Q5TC82 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC7.58□□□□□ -1.2
RC3H1Q5TC82 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC7.58□□□□□ -1.2
RC3H1Q5TC82 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC7.58□□□□□ -1.2
RC3H1Q5TC82 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RC3H1Q5TC82 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
RC3H1Q5TC82 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RC3H1Q5TC82 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
RC3H1Q5TC82 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC7.58□□□□□ -1.2
RC3H1Q5TC82 MTND4P35-201ENST00000604257 1375 ntBASIC7.58□□□□□ -1.2
RC3H1Q5TC82 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RC3H1Q5TC82 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RC3H1Q5TC82 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
RC3H1Q5TC82 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC7.57□□□□□ -1.2
RC3H1Q5TC82 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RC3H1Q5TC82 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC7.57□□□□□ -1.2
RC3H1Q5TC82 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RC3H1Q5TC82 OR5BR1P-201ENST00000524992 1330 ntBASIC7.57□□□□□ -1.2
RC3H1Q5TC82 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC7.57□□□□□ -1.2
RC3H1Q5TC82 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RC3H1Q5TC82 NMD3P1-201ENST00000439704 1488 ntBASIC7.57□□□□□ -1.2
RC3H1Q5TC82 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
RC3H1Q5TC82 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RC3H1Q5TC82 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
RC3H1Q5TC82 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC7.57□□□□□ -1.2
RC3H1Q5TC82 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
RC3H1Q5TC82 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RC3H1Q5TC82 OR10R3P-201ENST00000361688 942 ntBASIC7.57□□□□□ -1.2
RC3H1Q5TC82 Y_RNA.188-201ENST00000363952 111 ntBASIC7.57□□□□□ -1.2
RC3H1Q5TC82 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC7.57□□□□□ -1.2
RC3H1Q5TC82 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC7.57□□□□□ -1.2
RC3H1Q5TC82 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
RC3H1Q5TC82 MIR217-201ENST00000384817 110 ntBASIC7.57□□□□□ -1.2
RC3H1Q5TC82 MIR1302-3-201ENST00000408128 138 ntBASIC7.57□□□□□ -1.2
RC3H1Q5TC82 Y_RNA.608-201ENST00000410647 95 ntBASIC7.57□□□□□ -1.2
RC3H1Q5TC82 OR6E1P-201ENST00000414424 923 ntBASIC7.57□□□□□ -1.2
RC3H1Q5TC82 SNRPFP1-201ENST00000414761 252 ntBASIC7.57□□□□□ -1.2
RC3H1Q5TC82 AL645937.1-202ENST00000421799 937 ntBASIC7.57□□□□□ -1.2
RC3H1Q5TC82 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC7.57□□□□□ -1.2
RC3H1Q5TC82 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC7.57□□□□□ -1.2
RC3H1Q5TC82 Z93242.1-201ENST00000427102 353 ntBASIC7.57□□□□□ -1.2
RC3H1Q5TC82 AC012075.1-201ENST00000436549 580 ntBASIC7.57□□□□□ -1.2
RC3H1Q5TC82 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC7.57□□□□□ -1.2
RC3H1Q5TC82 CALM1P2-201ENST00000452941 448 ntBASIC7.57□□□□□ -1.2
RC3H1Q5TC82 MTND1P12-201ENST00000455231 147 ntBASIC7.57□□□□□ -1.2
RC3H1Q5TC82 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC7.57□□□□□ -1.2
RC3H1Q5TC82 KLHL2P1-201ENST00000508691 521 ntBASIC7.57□□□□□ -1.2
RC3H1Q5TC82 MTCO2P24-201ENST00000515611 426 ntBASIC7.57□□□□□ -1.2
RC3H1Q5TC82 RNU2-46P-201ENST00000517038 113 ntBASIC7.57□□□□□ -1.2
RC3H1Q5TC82 LY96-202ENST00000518893 430 ntTSL 3 BASIC7.57□□□□□ -1.2
RC3H1Q5TC82 GTF2IP11-201ENST00000526931 420 ntBASIC7.57□□□□□ -1.2
RC3H1Q5TC82 AP000790.1-201ENST00000528891 737 ntBASIC7.57□□□□□ -1.2
RC3H1Q5TC82 AL049872.1-201ENST00000556323 322 ntBASIC7.57□□□□□ -1.2
RC3H1Q5TC82 AC044860.2-201ENST00000561005 179 ntBASIC7.57□□□□□ -1.2
RC3H1Q5TC82 AC034105.3-201ENST00000565294 442 ntBASIC7.57□□□□□ -1.2
RC3H1Q5TC82 AC068020.1-201ENST00000594215 661 ntBASIC7.57□□□□□ -1.2
RC3H1Q5TC82 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RC3H1Q5TC82 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC7.57□□□□□ -1.2
RC3H1Q5TC82 AC130352.1-201ENST00000602979 661 ntBASIC7.57□□□□□ -1.2
RC3H1Q5TC82 AC103710.3-201ENST00000608157 948 ntBASIC7.57□□□□□ -1.2
RC3H1Q5TC82 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
RC3H1Q5TC82 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC7.57□□□□□ -1.2
RC3H1Q5TC82 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC7.57□□□□□ -1.2
RC3H1Q5TC82 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
RC3H1Q5TC82 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RC3H1Q5TC82 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RC3H1Q5TC82 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RC3H1Q5TC82 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC7.57□□□□□ -1.2
RC3H1Q5TC82 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
RC3H1Q5TC82 AC007342.5-201ENST00000571340 2142 ntBASIC7.57□□□□□ -1.2
RC3H1Q5TC82 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC7.57□□□□□ -1.2
RC3H1Q5TC82 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC7.57□□□□□ -1.2
RC3H1Q5TC82 AC092692.1-201ENST00000623625 2595 ntBASIC7.57□□□□□ -1.2
RC3H1Q5TC82 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RC3H1Q5TC82 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RC3H1Q5TC82 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
RC3H1Q5TC82 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RC3H1Q5TC82 AL157831.2-201ENST00000564681 3095 ntBASIC7.56□□□□□ -1.2
RC3H1Q5TC82 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
RC3H1Q5TC82 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC7.56□□□□□ -1.2
RC3H1Q5TC82 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC7.56□□□□□ -1.2
RC3H1Q5TC82 BPHL-201ENST00000380368 797 ntTSL 5 BASIC7.56□□□□□ -1.2
RC3H1Q5TC82 Y_RNA.476-201ENST00000384347 108 ntBASIC7.56□□□□□ -1.2
RC3H1Q5TC82 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
RC3H1Q5TC82 RPL23AP47-201ENST00000408017 460 ntBASIC7.56□□□□□ -1.2
RC3H1Q5TC82 MIR1286-201ENST00000408112 78 ntBASIC7.56□□□□□ -1.2
RC3H1Q5TC82 HYKK-202ENST00000408962 847 ntTSL 5 BASIC7.56□□□□□ -1.2
RC3H1Q5TC82 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC7.56□□□□□ -1.2
RC3H1Q5TC82 AP000534.2-201ENST00000412729 568 ntBASIC7.56□□□□□ -1.2
RC3H1Q5TC82 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RC3H1Q5TC82 ELOCP4-201ENST00000420090 333 ntBASIC7.56□□□□□ -1.2
RC3H1Q5TC82 MTCO2P27-201ENST00000420740 428 ntBASIC7.56□□□□□ -1.2
RC3H1Q5TC82 TEX41-204ENST00000423031 491 ntTSL 4 BASIC7.56□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms