Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SHROOM1Q2M3G4 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.85□□□□□ -1.63
SHROOM1Q2M3G4 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SHROOM1Q2M3G4 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SHROOM1Q2M3G4 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SHROOM1Q2M3G4 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.85□□□□□ -1.63
SHROOM1Q2M3G4 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.85□□□□□ -1.63
SHROOM1Q2M3G4 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SHROOM1Q2M3G4 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SHROOM1Q2M3G4 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SHROOM1Q2M3G4 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
SHROOM1Q2M3G4 CASC19-261ENST00000641853 1638 ntBASIC4.84□□□□□ -1.63
SHROOM1Q2M3G4 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.84□□□□□ -1.63
SHROOM1Q2M3G4 RNU6-819P-201ENST00000364116 107 ntBASIC4.84□□□□□ -1.63
SHROOM1Q2M3G4 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
SHROOM1Q2M3G4 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SHROOM1Q2M3G4 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.84□□□□□ -1.63
SHROOM1Q2M3G4 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.84□□□□□ -1.63
SHROOM1Q2M3G4 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.84□□□□□ -1.63
SHROOM1Q2M3G4 RRM2P4-201ENST00000441721 562 ntBASIC4.84□□□□□ -1.63
SHROOM1Q2M3G4 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.84□□□□□ -1.63
SHROOM1Q2M3G4 RPS4XP4-201ENST00000443195 763 ntBASIC4.84□□□□□ -1.63
SHROOM1Q2M3G4 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SHROOM1Q2M3G4 AL031584.1-201ENST00000447169 754 ntBASIC4.84□□□□□ -1.63
SHROOM1Q2M3G4 AC010683.1-201ENST00000473673 378 ntBASIC4.84□□□□□ -1.63
SHROOM1Q2M3G4 AC091959.2-201ENST00000477363 321 ntBASIC4.84□□□□□ -1.63
SHROOM1Q2M3G4 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.84□□□□□ -1.63
SHROOM1Q2M3G4 RNA5SP143-201ENST00000516936 115 ntBASIC4.84□□□□□ -1.63
SHROOM1Q2M3G4 SEC11B-201ENST00000518383 499 ntBASIC4.84□□□□□ -1.63
SHROOM1Q2M3G4 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC4.84□□□□□ -1.63
SHROOM1Q2M3G4 AC090151.1-201ENST00000520784 730 ntBASIC4.84□□□□□ -1.63
SHROOM1Q2M3G4 IFITM8P-201ENST00000522529 394 ntBASIC4.84□□□□□ -1.63
SHROOM1Q2M3G4 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.84□□□□□ -1.63
SHROOM1Q2M3G4 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.84□□□□□ -1.63
SHROOM1Q2M3G4 CYCSP28-201ENST00000534284 321 ntBASIC4.84□□□□□ -1.63
SHROOM1Q2M3G4 AC053481.3-201ENST00000577881 843 ntBASIC4.84□□□□□ -1.63
SHROOM1Q2M3G4 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.84□□□□□ -1.63
SHROOM1Q2M3G4 AL606490.9-201ENST00000603331 271 ntBASIC4.84□□□□□ -1.63
SHROOM1Q2M3G4 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
SHROOM1Q2M3G4 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.84□□□□□ -1.64
SHROOM1Q2M3G4 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.84□□□□□ -1.64
SHROOM1Q2M3G4 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
SHROOM1Q2M3G4 EOGT-210ENST00000615922 1931 ntBASIC4.84□□□□□ -1.64
SHROOM1Q2M3G4 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SHROOM1Q2M3G4 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.83□□□□□ -1.64
SHROOM1Q2M3G4 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.83□□□□□ -1.64
SHROOM1Q2M3G4 AC017104.4-201ENST00000636283 1592 ntBASIC4.83□□□□□ -1.64
SHROOM1Q2M3G4 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SHROOM1Q2M3G4 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SHROOM1Q2M3G4 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SHROOM1Q2M3G4 AC096656.1-201ENST00000623826 1364 ntBASIC4.83□□□□□ -1.64
SHROOM1Q2M3G4 RNU6-670P-201ENST00000364312 104 ntBASIC4.83□□□□□ -1.64
SHROOM1Q2M3G4 RNU6-152P-201ENST00000384037 107 ntBASIC4.83□□□□□ -1.64
SHROOM1Q2M3G4 MIR554-201ENST00000384874 96 ntBASIC4.83□□□□□ -1.64
SHROOM1Q2M3G4 RN7SKP159-201ENST00000410657 292 ntBASIC4.83□□□□□ -1.64
SHROOM1Q2M3G4 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SHROOM1Q2M3G4 AC073464.3-201ENST00000422564 712 ntBASIC4.83□□□□□ -1.64
SHROOM1Q2M3G4 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.83□□□□□ -1.64
SHROOM1Q2M3G4 AL358472.1-201ENST00000431295 329 ntBASIC4.83□□□□□ -1.64
SHROOM1Q2M3G4 GOT2P5-201ENST00000433995 546 ntBASIC4.83□□□□□ -1.64
SHROOM1Q2M3G4 RPL31P20-201ENST00000449593 360 ntBASIC4.83□□□□□ -1.64
SHROOM1Q2M3G4 AC239809.1-201ENST00000450470 217 ntBASIC4.83□□□□□ -1.64
SHROOM1Q2M3G4 MTND3P4-201ENST00000453537 303 ntBASIC4.83□□□□□ -1.64
SHROOM1Q2M3G4 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.83□□□□□ -1.64
SHROOM1Q2M3G4 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.83□□□□□ -1.64
SHROOM1Q2M3G4 AC138938.1-201ENST00000515431 782 ntBASIC4.83□□□□□ -1.64
SHROOM1Q2M3G4 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
SHROOM1Q2M3G4 HSPE1P5-201ENST00000561489 272 ntBASIC4.83□□□□□ -1.64
SHROOM1Q2M3G4 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.83□□□□□ -1.64
SHROOM1Q2M3G4 AC114878.2-201ENST00000604863 1251 ntBASIC4.83□□□□□ -1.64
SHROOM1Q2M3G4 AC073111.2-201ENST00000605657 1075 ntBASIC4.83□□□□□ -1.64
SHROOM1Q2M3G4 MIR6868-201ENST00000611215 58 ntBASIC4.83□□□□□ -1.64
SHROOM1Q2M3G4 AP006248.2-201ENST00000623309 592 ntBASIC4.83□□□□□ -1.64
SHROOM1Q2M3G4 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SHROOM1Q2M3G4 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SHROOM1Q2M3G4 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SHROOM1Q2M3G4 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
SHROOM1Q2M3G4 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
SHROOM1Q2M3G4 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SHROOM1Q2M3G4 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SHROOM1Q2M3G4 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
SHROOM1Q2M3G4 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SHROOM1Q2M3G4 AC016588.2-201ENST00000632484 3021 ntBASIC4.83□□□□□ -1.64
SHROOM1Q2M3G4 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.83□□□□□ -1.64
SHROOM1Q2M3G4 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
SHROOM1Q2M3G4 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SHROOM1Q2M3G4 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SHROOM1Q2M3G4 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SHROOM1Q2M3G4 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.82□□□□□ -1.64
SHROOM1Q2M3G4 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
SHROOM1Q2M3G4 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
SHROOM1Q2M3G4 SNORA71.3-201ENST00000362582 128 ntBASIC4.82□□□□□ -1.64
SHROOM1Q2M3G4 MIR195-201ENST00000385194 87 ntBASIC4.82□□□□□ -1.64
SHROOM1Q2M3G4 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.82□□□□□ -1.64
SHROOM1Q2M3G4 AL161631.1-201ENST00000417933 486 ntBASIC4.82□□□□□ -1.64
SHROOM1Q2M3G4 AC048351.1-201ENST00000420064 602 ntBASIC4.82□□□□□ -1.64
SHROOM1Q2M3G4 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SHROOM1Q2M3G4 SEC63P1-201ENST00000425785 1258 ntBASIC4.82□□□□□ -1.64
SHROOM1Q2M3G4 AL691449.1-201ENST00000426570 421 ntBASIC4.82□□□□□ -1.64
SHROOM1Q2M3G4 AL500522.2-201ENST00000448562 343 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms