Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.1□□□□□ -1.43
RSPO4Q2I0M5 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RSPO4Q2I0M5 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RSPO4Q2I0M5 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RSPO4Q2I0M5 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RSPO4Q2I0M5 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
RSPO4Q2I0M5 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RSPO4Q2I0M5 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
RSPO4Q2I0M5 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RSPO4Q2I0M5 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
RSPO4Q2I0M5 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RSPO4Q2I0M5 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RSPO4Q2I0M5 MFSD4BP1-201ENST00000513330 1552 ntBASIC6.1□□□□□ -1.43
RSPO4Q2I0M5 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
RSPO4Q2I0M5 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RSPO4Q2I0M5 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RSPO4Q2I0M5 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 NACAP2-201ENST00000318548 624 ntBASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 RNU6-462P-201ENST00000362659 105 ntBASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 Y_RNA.527-201ENST00000384573 102 ntBASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 AL161909.1-201ENST00000397390 712 ntBASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 MIR1286-201ENST00000408112 78 ntBASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 RNA5SP156-201ENST00000410250 110 ntBASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 RNU4-14P-201ENST00000410858 122 ntBASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 AL356968.1-201ENST00000416622 474 ntBASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 MTATP6P18-201ENST00000417994 673 ntBASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 RPS27AP6-201ENST00000427962 448 ntBASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 FO393419.3-201ENST00000428741 282 ntBASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 NPM1P34-201ENST00000428821 893 ntBASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 AC005033.1-201ENST00000428904 813 ntBASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 OR51AB1P-201ENST00000429046 620 ntBASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 USP24P1-201ENST00000433802 779 ntBASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 OR3D1P-201ENST00000438288 955 ntBASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 CBX1P1-201ENST00000440184 427 ntBASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 RPL23AP16-201ENST00000441715 421 ntBASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 COX6CP18-201ENST00000448769 222 ntBASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 HMGB3P22-202ENST00000451823 572 ntBASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 RPS4XP23-201ENST00000487801 237 ntBASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 AC004453.1-201ENST00000487895 408 ntBASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 RN7SL184P-201ENST00000488308 297 ntBASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 AC112184.1-201ENST00000505179 312 ntBASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 AC110794.1-201ENST00000505816 425 ntBASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 GAPDHP56-201ENST00000506031 988 ntBASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 MTND5P4-201ENST00000514978 288 ntBASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 AL671862.1-201ENST00000515851 349 ntBASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 SNORA40.12-201ENST00000516329 111 ntBASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 CDC42P3-201ENST00000518493 633 ntBASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 AL591767.3-201ENST00000554632 525 ntBASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 AC106785.4-201ENST00000569492 412 ntBASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 AC087575.1-201ENST00000585087 229 ntBASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 HMGN1P30-201ENST00000589286 268 ntBASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 BMS1P7-201ENST00000602440 1052 ntBASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 MIR98-201ENST00000606724 119 ntBASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 AC096992.2-201ENST00000609553 1684 ntBASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 AC079949.2-201ENST00000617117 2933 ntBASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
RSPO4Q2I0M5 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
RSPO4Q2I0M5 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.44
RSPO4Q2I0M5 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
RSPO4Q2I0M5 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.09□□□□□ -1.44
RSPO4Q2I0M5 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
RSPO4Q2I0M5 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
RSPO4Q2I0M5 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.09□□□□□ -1.44
RSPO4Q2I0M5 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms