Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 RPL5P13-201ENST00000462840 709 ntBASIC4.23□□□□□ -1.73
SIX1Q15475 RPL23AP71-201ENST00000470966 469 ntBASIC4.23□□□□□ -1.73
SIX1Q15475 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.23□□□□□ -1.73
SIX1Q15475 NPM1P17-201ENST00000479221 602 ntBASIC4.23□□□□□ -1.73
SIX1Q15475 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC4.23□□□□□ -1.73
SIX1Q15475 AC092902.1-201ENST00000486999 259 ntBASIC4.23□□□□□ -1.73
SIX1Q15475 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.23□□□□□ -1.73
SIX1Q15475 HPRT1P1-201ENST00000509498 657 ntBASIC4.23□□□□□ -1.73
SIX1Q15475 KCTD9P2-201ENST00000512203 1013 ntBASIC4.23□□□□□ -1.73
SIX1Q15475 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC4.23□□□□□ -1.73
SIX1Q15475 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.23□□□□□ -1.73
SIX1Q15475 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SIX1Q15475 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.23□□□□□ -1.73
SIX1Q15475 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.23□□□□□ -1.73
SIX1Q15475 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
SIX1Q15475 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.23□□□□□ -1.73
SIX1Q15475 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC4.23□□□□□ -1.73
SIX1Q15475 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.23□□□□□ -1.73
SIX1Q15475 SNX6P1-201ENST00000601728 1224 ntBASIC4.23□□□□□ -1.73
SIX1Q15475 AC019131.2-201ENST00000609071 870 ntBASIC4.23□□□□□ -1.73
SIX1Q15475 AC128687.2-201ENST00000609657 566 ntBASIC4.23□□□□□ -1.73
SIX1Q15475 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.23□□□□□ -1.73
SIX1Q15475 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SIX1Q15475 BDP1P-201ENST00000582658 1990 ntBASIC4.23□□□□□ -1.73
SIX1Q15475 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SIX1Q15475 AC107021.2-201ENST00000567714 2095 ntBASIC4.23□□□□□ -1.73
SIX1Q15475 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.23□□□□□ -1.73
SIX1Q15475 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.23□□□□□ -1.73
SIX1Q15475 AL136520.1-201ENST00000600311 1322 ntBASIC4.22□□□□□ -1.73
SIX1Q15475 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.22□□□□□ -1.73
SIX1Q15475 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SIX1Q15475 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
SIX1Q15475 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SIX1Q15475 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SIX1Q15475 SPATA2P1-201ENST00000431223 2055 ntBASIC4.22□□□□□ -1.73
SIX1Q15475 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.22□□□□□ -1.73
SIX1Q15475 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.22□□□□□ -1.73
SIX1Q15475 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SIX1Q15475 SNORA62-201ENST00000365493 153 ntBASIC4.22□□□□□ -1.73
SIX1Q15475 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SIX1Q15475 RNU6-1263P-201ENST00000384601 106 ntBASIC4.22□□□□□ -1.73
SIX1Q15475 AL161909.1-201ENST00000397390 712 ntBASIC4.22□□□□□ -1.73
SIX1Q15475 RN7SKP182-201ENST00000410772 298 ntBASIC4.22□□□□□ -1.73
SIX1Q15475 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.22□□□□□ -1.73
SIX1Q15475 AC013410.2-201ENST00000422627 201 ntBASIC4.22□□□□□ -1.73
SIX1Q15475 AC016712.1-201ENST00000431088 378 ntBASIC4.22□□□□□ -1.73
SIX1Q15475 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.22□□□□□ -1.73
SIX1Q15475 AL356535.1-201ENST00000440335 398 ntBASIC4.22□□□□□ -1.73
SIX1Q15475 VN1R25P-201ENST00000443385 738 ntBASIC4.22□□□□□ -1.73
SIX1Q15475 YWHAQP9-201ENST00000445891 512 ntBASIC4.22□□□□□ -1.73
SIX1Q15475 AL157827.1-201ENST00000447622 132 ntBASIC4.22□□□□□ -1.73
SIX1Q15475 AC069277.2-201ENST00000454211 432 ntBASIC4.22□□□□□ -1.73
SIX1Q15475 VN1R40P-201ENST00000455196 941 ntBASIC4.22□□□□□ -1.73
SIX1Q15475 MTND2P28-201ENST00000457540 1044 ntBASIC4.22□□□□□ -1.73
SIX1Q15475 AC093267.1-201ENST00000489176 961 ntBASIC4.22□□□□□ -1.73
SIX1Q15475 RPL7P24-201ENST00000493052 752 ntBASIC4.22□□□□□ -1.73
SIX1Q15475 MTCO2P9-201ENST00000503214 694 ntBASIC4.22□□□□□ -1.73
SIX1Q15475 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.22□□□□□ -1.73
SIX1Q15475 AC099522.1-202ENST00000514718 367 ntBASIC4.22□□□□□ -1.73
SIX1Q15475 AP003102.1-201ENST00000525638 661 ntBASIC4.22□□□□□ -1.73
SIX1Q15475 AC004923.2-201ENST00000529649 369 ntBASIC4.22□□□□□ -1.73
SIX1Q15475 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.22□□□□□ -1.73
SIX1Q15475 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.22□□□□□ -1.73
SIX1Q15475 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.22□□□□□ -1.73
SIX1Q15475 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.22□□□□□ -1.73
SIX1Q15475 AC012417.1-201ENST00000582307 1039 ntBASIC4.22□□□□□ -1.73
SIX1Q15475 MIR4697-201ENST00000582977 78 ntBASIC4.22□□□□□ -1.73
SIX1Q15475 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.22□□□□□ -1.73
SIX1Q15475 HMGB1P50-201ENST00000605814 607 ntBASIC4.22□□□□□ -1.73
SIX1Q15475 AP000255.1-201ENST00000610276 676 ntBASIC4.22□□□□□ -1.73
SIX1Q15475 AC090617.9-201ENST00000623751 147 ntBASIC4.22□□□□□ -1.73
SIX1Q15475 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SIX1Q15475 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
SIX1Q15475 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
SIX1Q15475 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
SIX1Q15475 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
SIX1Q15475 AL359715.4-201ENST00000606629 1436 ntBASIC4.21□□□□□ -1.73
SIX1Q15475 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
SIX1Q15475 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.21□□□□□ -1.74
SIX1Q15475 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SIX1Q15475 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
SIX1Q15475 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
SIX1Q15475 RAD1P1-201ENST00000231383 813 ntBASIC4.21□□□□□ -1.74
SIX1Q15475 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SIX1Q15475 SNORA63.3-201ENST00000362682 132 ntBASIC4.21□□□□□ -1.74
SIX1Q15475 RNA5SP447-201ENST00000363749 119 ntBASIC4.21□□□□□ -1.74
SIX1Q15475 BMS1P3-201ENST00000372011 932 ntBASIC4.21□□□□□ -1.74
SIX1Q15475 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SIX1Q15475 SNORA79B-201ENST00000410557 148 ntBASIC4.21□□□□□ -1.74
SIX1Q15475 RN7SKP247-201ENST00000411094 308 ntBASIC4.21□□□□□ -1.74
SIX1Q15475 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.21□□□□□ -1.74
SIX1Q15475 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC4.21□□□□□ -1.74
SIX1Q15475 HSFY7P-201ENST00000432672 318 ntBASIC4.21□□□□□ -1.74
SIX1Q15475 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.21□□□□□ -1.74
SIX1Q15475 ATP5HP2-201ENST00000433885 485 ntBASIC4.21□□□□□ -1.74
SIX1Q15475 AC093716.1-201ENST00000435923 377 ntBASIC4.21□□□□□ -1.74
SIX1Q15475 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC4.21□□□□□ -1.74
SIX1Q15475 HSFY8P-201ENST00000437934 318 ntBASIC4.21□□□□□ -1.74
SIX1Q15475 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC4.21□□□□□ -1.74
SIX1Q15475 CYCSP42-201ENST00000450823 238 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms