Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 AC022404.1-201ENST00000555320 273 ntBASIC6.23□□□□□ -1.41
SOX4Q06945 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC6.23□□□□□ -1.41
SOX4Q06945 AC096996.1-201ENST00000563813 325 ntBASIC6.23□□□□□ -1.41
SOX4Q06945 AC141257.3-201ENST00000572906 215 ntBASIC6.23□□□□□ -1.41
SOX4Q06945 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC6.23□□□□□ -1.41
SOX4Q06945 AC013553.2-201ENST00000604244 589 ntBASIC6.23□□□□□ -1.41
SOX4Q06945 COX6CP4-201ENST00000605798 228 ntBASIC6.23□□□□□ -1.41
SOX4Q06945 MIR6768-201ENST00000610734 72 ntBASIC6.23□□□□□ -1.41
SOX4Q06945 YWHAEP7-203ENST00000622054 312 ntBASIC6.23□□□□□ -1.41
SOX4Q06945 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC6.23□□□□□ -1.41
SOX4Q06945 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.23□□□□□ -1.41
SOX4Q06945 SRRM1P3-201ENST00000426911 2678 ntBASIC6.23□□□□□ -1.41
SOX4Q06945 AC022164.1-201ENST00000568767 2673 ntBASIC6.23□□□□□ -1.41
SOX4Q06945 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.23□□□□□ -1.41
SOX4Q06945 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
SOX4Q06945 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SOX4Q06945 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SOX4Q06945 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.23□□□□□ -1.41
SOX4Q06945 AC112255.1-201ENST00000624070 2493 ntBASIC6.23□□□□□ -1.41
SOX4Q06945 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
SOX4Q06945 AL137058.3-201ENST00000624531 3099 ntBASIC6.23□□□□□ -1.41
SOX4Q06945 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.23□□□□□ -1.41
SOX4Q06945 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
SOX4Q06945 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SOX4Q06945 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
SOX4Q06945 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
SOX4Q06945 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SOX4Q06945 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
SOX4Q06945 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.22□□□□□ -1.41
SOX4Q06945 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.22□□□□□ -1.41
SOX4Q06945 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.22□□□□□ -1.41
SOX4Q06945 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
SOX4Q06945 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.22□□□□□ -1.41
SOX4Q06945 AC005224.3-201ENST00000584683 2140 ntBASIC6.22□□□□□ -1.41
SOX4Q06945 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SOX4Q06945 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
SOX4Q06945 Y_RNA.72-201ENST00000362894 103 ntBASIC6.22□□□□□ -1.41
SOX4Q06945 RNU6-492P-201ENST00000363035 104 ntBASIC6.22□□□□□ -1.41
SOX4Q06945 RNY4P34-201ENST00000364779 95 ntBASIC6.22□□□□□ -1.41
SOX4Q06945 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.22□□□□□ -1.41
SOX4Q06945 CUBN-201ENST00000377823 705 ntTSL 3 BASIC6.22□□□□□ -1.41
SOX4Q06945 RNU6-767P-201ENST00000384132 107 ntBASIC6.22□□□□□ -1.41
SOX4Q06945 RNU6-533P-201ENST00000384144 107 ntBASIC6.22□□□□□ -1.41
SOX4Q06945 AL121835.1-201ENST00000404250 354 ntBASIC6.22□□□□□ -1.41
SOX4Q06945 RN7SKP293-201ENST00000411389 296 ntBASIC6.22□□□□□ -1.41
SOX4Q06945 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC6.22□□□□□ -1.41
SOX4Q06945 AL139128.1-201ENST00000413921 941 ntBASIC6.22□□□□□ -1.41
SOX4Q06945 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC6.22□□□□□ -1.41
SOX4Q06945 TMBIM7P-201ENST00000418074 855 ntBASIC6.22□□□□□ -1.41
SOX4Q06945 AC083875.1-201ENST00000419509 405 ntBASIC6.22□□□□□ -1.41
SOX4Q06945 USP9YP36-201ENST00000424581 829 ntBASIC6.22□□□□□ -1.41
SOX4Q06945 AL035410.1-201ENST00000427409 427 ntBASIC6.22□□□□□ -1.41
SOX4Q06945 MTCO2P12-201ENST00000427426 682 ntBASIC6.22□□□□□ -1.41
SOX4Q06945 RPL7P56-201ENST00000429441 717 ntBASIC6.22□□□□□ -1.41
SOX4Q06945 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.22□□□□□ -1.41
SOX4Q06945 RPL12P16-201ENST00000431098 498 ntBASIC6.22□□□□□ -1.41
SOX4Q06945 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.22□□□□□ -1.41
SOX4Q06945 OR52B5P-201ENST00000435337 951 ntBASIC6.22□□□□□ -1.41
SOX4Q06945 AC073909.1-201ENST00000447112 999 ntBASIC6.22□□□□□ -1.41
SOX4Q06945 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC6.22□□□□□ -1.41
SOX4Q06945 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC6.22□□□□□ -1.41
SOX4Q06945 RN7SL72P-201ENST00000460697 269 ntBASIC6.22□□□□□ -1.41
SOX4Q06945 AC073610.1-201ENST00000489971 396 ntBASIC6.22□□□□□ -1.41
SOX4Q06945 RPL39P36-201ENST00000490784 156 ntBASIC6.22□□□□□ -1.41
SOX4Q06945 AC138409.2-202ENST00000507274 458 ntBASIC6.22□□□□□ -1.41
SOX4Q06945 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
SOX4Q06945 TOMM22P4-201ENST00000511318 336 ntBASIC6.22□□□□□ -1.41
SOX4Q06945 RNU6-615P-201ENST00000516065 106 ntBASIC6.22□□□□□ -1.41
SOX4Q06945 AC021678.3-201ENST00000517893 476 ntBASIC6.22□□□□□ -1.41
SOX4Q06945 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC6.22□□□□□ -1.41
SOX4Q06945 AC090424.1-201ENST00000535243 736 ntBASIC6.22□□□□□ -1.41
SOX4Q06945 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC6.22□□□□□ -1.41
SOX4Q06945 HIF1AP1-201ENST00000553642 175 ntBASIC6.22□□□□□ -1.41
SOX4Q06945 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC6.22□□□□□ -1.41
SOX4Q06945 AC107954.1-201ENST00000565906 727 ntBASIC6.22□□□□□ -1.41
SOX4Q06945 AC011712.1-201ENST00000588959 234 ntBASIC6.22□□□□□ -1.41
SOX4Q06945 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.22□□□□□ -1.41
SOX4Q06945 RPL12P25-202ENST00000598100 674 ntBASIC6.22□□□□□ -1.41
SOX4Q06945 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.22□□□□□ -1.41
SOX4Q06945 AC104695.2-201ENST00000605056 775 ntBASIC6.22□□□□□ -1.41
SOX4Q06945 AL132765.2-201ENST00000610812 351 ntBASIC6.22□□□□□ -1.41
SOX4Q06945 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
SOX4Q06945 CCT8P1-201ENST00000413611 1657 ntBASIC6.22□□□□□ -1.41
SOX4Q06945 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC6.22□□□□□ -1.41
SOX4Q06945 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.22□□□□□ -1.41
SOX4Q06945 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SOX4Q06945 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.22□□□□□ -1.41
SOX4Q06945 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SOX4Q06945 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.22□□□□□ -1.41
SOX4Q06945 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SOX4Q06945 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SOX4Q06945 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
SOX4Q06945 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
SOX4Q06945 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.22□□□□□ -1.41
SOX4Q06945 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
SOX4Q06945 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SOX4Q06945 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.21□□□□□ -1.41
SOX4Q06945 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
SOX4Q06945 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.41
SOX4Q06945 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms