Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 GTF3AP1-201ENST00000416942 1004 ntBASIC3.13□□□□□ -1.91
SSBP1Q04837 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC3.13□□□□□ -1.91
SSBP1Q04837 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.13□□□□□ -1.91
SSBP1Q04837 Z74696.2-201ENST00000436514 498 ntBASIC3.13□□□□□ -1.91
SSBP1Q04837 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.13□□□□□ -1.91
SSBP1Q04837 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.13□□□□□ -1.91
SSBP1Q04837 RPS4XP2-201ENST00000458402 793 ntBASIC3.13□□□□□ -1.91
SSBP1Q04837 AC010618.1-201ENST00000469924 477 ntBASIC3.13□□□□□ -1.91
SSBP1Q04837 AC105233.1-201ENST00000498840 781 ntBASIC3.13□□□□□ -1.91
SSBP1Q04837 AC111000.3-201ENST00000508057 576 ntBASIC3.13□□□□□ -1.91
SSBP1Q04837 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.13□□□□□ -1.91
SSBP1Q04837 SNORA70.14-201ENST00000516205 110 ntBASIC3.13□□□□□ -1.91
SSBP1Q04837 RN7SKP289-201ENST00000517244 295 ntBASIC3.13□□□□□ -1.91
SSBP1Q04837 NDUFB9P3-201ENST00000521269 501 ntBASIC3.13□□□□□ -1.91
SSBP1Q04837 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.13□□□□□ -1.91
SSBP1Q04837 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SSBP1Q04837 AL358913.1-201ENST00000554342 121 ntBASIC3.13□□□□□ -1.91
SSBP1Q04837 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SSBP1Q04837 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.13□□□□□ -1.91
SSBP1Q04837 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.13□□□□□ -1.91
SSBP1Q04837 MIR5047-201ENST00000579212 100 ntBASIC3.13□□□□□ -1.91
SSBP1Q04837 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.13□□□□□ -1.91
SSBP1Q04837 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC3.13□□□□□ -1.91
SSBP1Q04837 AC007390.2-201ENST00000606229 3803 ntBASIC3.13□□□□□ -1.91
SSBP1Q04837 AC019193.2-201ENST00000610012 634 ntBASIC3.13□□□□□ -1.91
SSBP1Q04837 AC022149.2-201ENST00000621061 203 ntBASIC3.13□□□□□ -1.91
SSBP1Q04837 AC079684.1-201ENST00000621405 437 ntBASIC3.13□□□□□ -1.91
SSBP1Q04837 AL732618.1-201ENST00000623251 301 ntBASIC3.13□□□□□ -1.91
SSBP1Q04837 MIR3653-201ENST00000625572 110 ntBASIC3.13□□□□□ -1.91
SSBP1Q04837 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.13□□□□□ -1.91
SSBP1Q04837 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SSBP1Q04837 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
SSBP1Q04837 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.13□□□□□ -1.91
SSBP1Q04837 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.13□□□□□ -1.91
SSBP1Q04837 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.12□□□□□ -1.91
SSBP1Q04837 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SSBP1Q04837 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SSBP1Q04837 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SSBP1Q04837 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.12□□□□□ -1.91
SSBP1Q04837 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC3.12□□□□□ -1.91
SSBP1Q04837 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.12□□□□□ -1.91
SSBP1Q04837 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SSBP1Q04837 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SSBP1Q04837 MIR30E-201ENST00000362104 92 ntBASIC3.12□□□□□ -1.91
SSBP1Q04837 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
SSBP1Q04837 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
SSBP1Q04837 U3.39-201ENST00000408569 239 ntBASIC3.12□□□□□ -1.91
SSBP1Q04837 RNU2-22P-201ENST00000411266 212 ntBASIC3.12□□□□□ -1.91
SSBP1Q04837 RPS7P13-201ENST00000413955 498 ntBASIC3.12□□□□□ -1.91
SSBP1Q04837 AC093578.1-201ENST00000415219 368 ntBASIC3.12□□□□□ -1.91
SSBP1Q04837 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.12□□□□□ -1.91
SSBP1Q04837 AC068533.1-201ENST00000418542 415 ntBASIC3.12□□□□□ -1.91
SSBP1Q04837 SAGE2P-201ENST00000420011 2126 ntBASIC3.12□□□□□ -1.91
SSBP1Q04837 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.12□□□□□ -1.91
SSBP1Q04837 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC3.12□□□□□ -1.91
SSBP1Q04837 COX6CP15-201ENST00000426313 211 ntBASIC3.12□□□□□ -1.91
SSBP1Q04837 DNAJC19P7-201ENST00000428811 344 ntBASIC3.12□□□□□ -1.91
SSBP1Q04837 B3GNT2P1-201ENST00000434960 952 ntBASIC3.12□□□□□ -1.91
SSBP1Q04837 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.12□□□□□ -1.91
SSBP1Q04837 RPL12P11-201ENST00000439970 501 ntBASIC3.12□□□□□ -1.91
SSBP1Q04837 CBX1P1-201ENST00000440184 427 ntBASIC3.12□□□□□ -1.91
SSBP1Q04837 FHP1-201ENST00000442741 703 ntBASIC3.12□□□□□ -1.91
SSBP1Q04837 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC3.12□□□□□ -1.91
SSBP1Q04837 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.12□□□□□ -1.91
SSBP1Q04837 SETD6P1-201ENST00000444575 317 ntBASIC3.12□□□□□ -1.91
SSBP1Q04837 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.12□□□□□ -1.91
SSBP1Q04837 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.12□□□□□ -1.91
SSBP1Q04837 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SSBP1Q04837 FABP5P12-201ENST00000515543 389 ntBASIC3.12□□□□□ -1.91
SSBP1Q04837 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SSBP1Q04837 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.12□□□□□ -1.91
SSBP1Q04837 TRAV15-201ENST00000556680 249 ntBASIC3.12□□□□□ -1.91
SSBP1Q04837 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.12□□□□□ -1.91
SSBP1Q04837 AC090510.2-201ENST00000617465 629 ntBASIC3.12□□□□□ -1.91
SSBP1Q04837 AC105105.5-201ENST00000622635 1294 ntBASIC3.12□□□□□ -1.91
SSBP1Q04837 AC073530.2-201ENST00000623987 261 ntBASIC3.12□□□□□ -1.91
SSBP1Q04837 AC073073.2-201ENST00000609827 2578 ntBASIC3.12□□□□□ -1.91
SSBP1Q04837 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SSBP1Q04837 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
SSBP1Q04837 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
SSBP1Q04837 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SSBP1Q04837 OR4G1P-202ENST00000641173 1788 ntBASIC3.12□□□□□ -1.91
SSBP1Q04837 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
SSBP1Q04837 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.12□□□□□ -1.91
SSBP1Q04837 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SSBP1Q04837 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SSBP1Q04837 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.11□□□□□ -1.91
SSBP1Q04837 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.11□□□□□ -1.91
SSBP1Q04837 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
SSBP1Q04837 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SSBP1Q04837 RNA5SP447-201ENST00000363749 119 ntBASIC3.11□□□□□ -1.91
SSBP1Q04837 EI24P2-201ENST00000397776 1076 ntBASIC3.11□□□□□ -1.91
SSBP1Q04837 RPS16P5-201ENST00000406501 404 ntBASIC3.11□□□□□ -1.91
SSBP1Q04837 SNORA79B-201ENST00000410557 148 ntBASIC3.11□□□□□ -1.91
SSBP1Q04837 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.11□□□□□ -1.91
SSBP1Q04837 AC245291.1-201ENST00000419501 328 ntBASIC3.11□□□□□ -1.91
SSBP1Q04837 RPL23AP38-201ENST00000423801 469 ntBASIC3.11□□□□□ -1.91
SSBP1Q04837 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.11□□□□□ -1.91
SSBP1Q04837 AL691449.1-201ENST00000426570 421 ntBASIC3.11□□□□□ -1.91
SSBP1Q04837 CNOT7P1-201ENST00000429006 852 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms