Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC018797.3-201ENST00000513388 1241 ntBASIC3.62□□□□□ -1.83
H3F3AP84243 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC3.62□□□□□ -1.83
H3F3AP84243 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.62□□□□□ -1.83
H3F3AP84243 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.62□□□□□ -1.83
H3F3AP84243 AC068714.1-201ENST00000559623 800 ntBASIC3.62□□□□□ -1.83
H3F3AP84243 AC022968.1-201ENST00000567372 442 ntBASIC3.62□□□□□ -1.83
H3F3AP84243 AC025627.2-201ENST00000576220 160 ntBASIC3.62□□□□□ -1.83
H3F3AP84243 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
H3F3AP84243 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.62□□□□□ -1.83
H3F3AP84243 AC010680.3-201ENST00000604215 520 ntBASIC3.62□□□□□ -1.83
H3F3AP84243 HMGB1P50-201ENST00000605814 607 ntBASIC3.62□□□□□ -1.83
H3F3AP84243 OR6R2P-201ENST00000609216 300 ntBASIC3.62□□□□□ -1.83
H3F3AP84243 AC023043.4-201ENST00000612081 449 ntBASIC3.62□□□□□ -1.83
H3F3AP84243 AC112484.5-201ENST00000624189 228 ntBASIC3.62□□□□□ -1.83
H3F3AP84243 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
H3F3AP84243 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
H3F3AP84243 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
H3F3AP84243 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
H3F3AP84243 CASC19-261ENST00000641853 1638 ntBASIC3.62□□□□□ -1.83
H3F3AP84243 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
H3F3AP84243 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
H3F3AP84243 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.62□□□□□ -1.83
H3F3AP84243 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
H3F3AP84243 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
H3F3AP84243 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.61□□□□□ -1.83
H3F3AP84243 AC093311.1-201ENST00000506586 2021 ntBASIC3.61□□□□□ -1.83
H3F3AP84243 AC015813.6-201ENST00000624409 5808 ntBASIC3.61□□□□□ -1.83
H3F3AP84243 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.61□□□□□ -1.83
H3F3AP84243 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
H3F3AP84243 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.61□□□□□ -1.83
H3F3AP84243 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
H3F3AP84243 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
H3F3AP84243 AL592437.2-201ENST00000421655 2434 ntBASIC3.61□□□□□ -1.83
H3F3AP84243 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.61□□□□□ -1.83
H3F3AP84243 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.61□□□□□ -1.83
H3F3AP84243 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
H3F3AP84243 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.61□□□□□ -1.83
H3F3AP84243 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.61□□□□□ -1.83
H3F3AP84243 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
H3F3AP84243 MIR3074-201ENST00000384885 81 ntBASIC3.61□□□□□ -1.83
H3F3AP84243 HMGB3P19-201ENST00000403971 560 ntBASIC3.61□□□□□ -1.83
H3F3AP84243 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.61□□□□□ -1.83
H3F3AP84243 CYP4F29P-201ENST00000420685 446 ntBASIC3.61□□□□□ -1.83
H3F3AP84243 RPL23AP4-201ENST00000427757 463 ntBASIC3.61□□□□□ -1.83
H3F3AP84243 RPS4XP4-201ENST00000443195 763 ntBASIC3.61□□□□□ -1.83
H3F3AP84243 AC114755.5-201ENST00000447760 831 ntBASIC3.61□□□□□ -1.83
H3F3AP84243 S100A11P1-201ENST00000477525 312 ntBASIC3.61□□□□□ -1.83
H3F3AP84243 METTL15P1-201ENST00000481421 1045 ntBASIC3.61□□□□□ -1.83
H3F3AP84243 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.61□□□□□ -1.83
H3F3AP84243 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC3.61□□□□□ -1.83
H3F3AP84243 MIR2114-201ENST00000516645 80 ntBASIC3.61□□□□□ -1.83
H3F3AP84243 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
H3F3AP84243 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.61□□□□□ -1.83
H3F3AP84243 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.61□□□□□ -1.83
H3F3AP84243 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.61□□□□□ -1.83
H3F3AP84243 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.61□□□□□ -1.83
H3F3AP84243 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.61□□□□□ -1.83
H3F3AP84243 AC084757.1-201ENST00000559987 490 ntBASIC3.61□□□□□ -1.83
H3F3AP84243 AL360157.1-201ENST00000565962 87 ntBASIC3.61□□□□□ -1.83
H3F3AP84243 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.61□□□□□ -1.83
H3F3AP84243 AC110743.1-201ENST00000584870 478 ntBASIC3.61□□□□□ -1.83
H3F3AP84243 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.61□□□□□ -1.83
H3F3AP84243 RNU4-89P-201ENST00000607443 133 ntBASIC3.61□□□□□ -1.83
H3F3AP84243 MIR6868-201ENST00000611215 58 ntBASIC3.61□□□□□ -1.83
H3F3AP84243 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
H3F3AP84243 AP003072.5-201ENST00000623872 773 ntBASIC3.61□□□□□ -1.83
H3F3AP84243 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.61□□□□□ -1.83
H3F3AP84243 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
H3F3AP84243 OR11H5P-202ENST00000641612 1325 ntBASIC3.61□□□□□ -1.83
H3F3AP84243 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.61□□□□□ -1.83
H3F3AP84243 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
H3F3AP84243 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
H3F3AP84243 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.61□□□□□ -1.83
H3F3AP84243 AP001486.2-201ENST00000561652 5113 ntBASIC3.6□□□□□ -1.83
H3F3AP84243 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
H3F3AP84243 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC3.6□□□□□ -1.83
H3F3AP84243 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
H3F3AP84243 SNORD35B-201ENST00000363660 87 ntBASIC3.6□□□□□ -1.83
H3F3AP84243 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
H3F3AP84243 RNU1-13P-201ENST00000384499 162 ntBASIC3.6□□□□□ -1.83
H3F3AP84243 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.6□□□□□ -1.83
H3F3AP84243 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC3.6□□□□□ -1.83
H3F3AP84243 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.6□□□□□ -1.83
H3F3AP84243 FTH1P6-201ENST00000430768 320 ntBASIC3.6□□□□□ -1.83
H3F3AP84243 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.6□□□□□ -1.83
H3F3AP84243 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.6□□□□□ -1.83
H3F3AP84243 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.6□□□□□ -1.83
H3F3AP84243 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC3.6□□□□□ -1.83
H3F3AP84243 MTND6P6-201ENST00000478031 263 ntBASIC3.6□□□□□ -1.83
H3F3AP84243 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.6□□□□□ -1.83
H3F3AP84243 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.6□□□□□ -1.83
H3F3AP84243 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.6□□□□□ -1.83
H3F3AP84243 SMARCE1P4-201ENST00000523647 241 ntBASIC3.6□□□□□ -1.83
H3F3AP84243 NPM1P35-201ENST00000533043 868 ntBASIC3.6□□□□□ -1.83
H3F3AP84243 AC091516.1-201ENST00000549191 703 ntBASIC3.6□□□□□ -1.83
H3F3AP84243 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.6□□□□□ -1.83
H3F3AP84243 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.6□□□□□ -1.83
H3F3AP84243 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
H3F3AP84243 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.6□□□□□ -1.83
H3F3AP84243 AC004825.2-201ENST00000616634 455 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms