Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.28□□□□□ -1.72
CBX1P83916 HNRNPCP4-201ENST00000571636 900 ntBASIC4.28□□□□□ -1.72
CBX1P83916 BX322635.1-201ENST00000605804 496 ntBASIC4.28□□□□□ -1.72
CBX1P83916 AC242628.1-201ENST00000606810 391 ntBASIC4.28□□□□□ -1.72
CBX1P83916 AP001521.2-201ENST00000608772 546 ntBASIC4.28□□□□□ -1.72
CBX1P83916 AL121612.2-201ENST00000612261 482 ntBASIC4.28□□□□□ -1.72
CBX1P83916 AP004607.9-201ENST00000618202 316 ntBASIC4.28□□□□□ -1.72
CBX1P83916 AC007546.1-201ENST00000619452 559 ntBASIC4.28□□□□□ -1.72
CBX1P83916 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.28□□□□□ -1.72
CBX1P83916 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.28□□□□□ -1.72
CBX1P83916 DDX6P1-205ENST00000441966 1436 ntBASIC4.28□□□□□ -1.72
CBX1P83916 AL592437.2-201ENST00000421655 2434 ntBASIC4.27□□□□□ -1.73
CBX1P83916 AC053481.2-202ENST00000582394 1500 ntBASIC4.27□□□□□ -1.73
CBX1P83916 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CBX1P83916 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CBX1P83916 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.27□□□□□ -1.73
CBX1P83916 RNU6-317P-201ENST00000384031 107 ntBASIC4.27□□□□□ -1.73
CBX1P83916 AP002530.1-201ENST00000405705 684 ntBASIC4.27□□□□□ -1.73
CBX1P83916 PGBD4P8-201ENST00000412993 562 ntBASIC4.27□□□□□ -1.73
CBX1P83916 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.27□□□□□ -1.73
CBX1P83916 GTF3AP1-201ENST00000416942 1004 ntBASIC4.27□□□□□ -1.73
CBX1P83916 RPS15AP6-201ENST00000420703 385 ntBASIC4.27□□□□□ -1.73
CBX1P83916 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.27□□□□□ -1.73
CBX1P83916 AL355433.1-201ENST00000422804 300 ntBASIC4.27□□□□□ -1.73
CBX1P83916 RPS24P8-201ENST00000431490 402 ntBASIC4.27□□□□□ -1.73
CBX1P83916 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
CBX1P83916 RPL23AP93-201ENST00000440847 484 ntBASIC4.27□□□□□ -1.73
CBX1P83916 MRPS31P2-201ENST00000451581 518 ntBASIC4.27□□□□□ -1.73
CBX1P83916 RN7SL172P-201ENST00000460535 303 ntBASIC4.27□□□□□ -1.73
CBX1P83916 OR52A4P-201ENST00000472867 958 ntBASIC4.27□□□□□ -1.73
CBX1P83916 AL049830.2-201ENST00000480072 201 ntBASIC4.27□□□□□ -1.73
CBX1P83916 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.27□□□□□ -1.73
CBX1P83916 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.27□□□□□ -1.73
CBX1P83916 AC024558.1-201ENST00000505008 528 ntBASIC4.27□□□□□ -1.73
CBX1P83916 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.27□□□□□ -1.73
CBX1P83916 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.27□□□□□ -1.73
CBX1P83916 NDUFB4P9-201ENST00000511646 388 ntBASIC4.27□□□□□ -1.73
CBX1P83916 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.27□□□□□ -1.73
CBX1P83916 RN7SKP83-201ENST00000516512 178 ntBASIC4.27□□□□□ -1.73
CBX1P83916 RN7SKP66-201ENST00000516681 231 ntBASIC4.27□□□□□ -1.73
CBX1P83916 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.27□□□□□ -1.73
CBX1P83916 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.27□□□□□ -1.73
CBX1P83916 AC006064.5-201ENST00000541782 248 ntBASIC4.27□□□□□ -1.73
CBX1P83916 AL109766.1-201ENST00000555080 552 ntBASIC4.27□□□□□ -1.73
CBX1P83916 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.27□□□□□ -1.73
CBX1P83916 AL845331.3-202ENST00000562856 261 ntBASIC4.27□□□□□ -1.73
CBX1P83916 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.27□□□□□ -1.73
CBX1P83916 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC4.27□□□□□ -1.73
CBX1P83916 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.27□□□□□ -1.73
CBX1P83916 AL355816.1-201ENST00000607951 118 ntBASIC4.27□□□□□ -1.73
CBX1P83916 AC009163.6-201ENST00000612367 342 ntBASIC4.27□□□□□ -1.73
CBX1P83916 EIF3FP1-201ENST00000613970 806 ntBASIC4.27□□□□□ -1.73
CBX1P83916 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.27□□□□□ -1.73
CBX1P83916 MIR6891-201ENST00000618788 93 ntBASIC4.27□□□□□ -1.73
CBX1P83916 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC4.27□□□□□ -1.73
CBX1P83916 AP006248.2-201ENST00000623309 592 ntBASIC4.27□□□□□ -1.73
CBX1P83916 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.27□□□□□ -1.73
CBX1P83916 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.27□□□□□ -1.73
CBX1P83916 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.27□□□□□ -1.73
CBX1P83916 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CBX1P83916 AC009951.1-201ENST00000623674 2614 ntBASIC4.27□□□□□ -1.73
CBX1P83916 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CBX1P83916 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CBX1P83916 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CBX1P83916 AC108467.2-201ENST00000617640 1597 ntBASIC4.27□□□□□ -1.73
CBX1P83916 ZNF826P-207ENST00000622273 1910 ntBASIC4.27□□□□□ -1.73
CBX1P83916 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CBX1P83916 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
CBX1P83916 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CBX1P83916 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.26□□□□□ -1.73
CBX1P83916 AC007529.1-201ENST00000418574 2178 ntBASIC4.26□□□□□ -1.73
CBX1P83916 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
CBX1P83916 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CBX1P83916 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
CBX1P83916 SNORA51.1-201ENST00000363243 140 ntBASIC4.26□□□□□ -1.73
CBX1P83916 SNORD6-201ENST00000365444 73 ntBASIC4.26□□□□□ -1.73
CBX1P83916 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CBX1P83916 AC136624.1-201ENST00000400791 413 ntBASIC4.26□□□□□ -1.73
CBX1P83916 U3.36-201ENST00000408418 213 ntBASIC4.26□□□□□ -1.73
CBX1P83916 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.26□□□□□ -1.73
CBX1P83916 KCTD9P3-201ENST00000434597 1169 ntBASIC4.26□□□□□ -1.73
CBX1P83916 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.26□□□□□ -1.73
CBX1P83916 PTMAP6-201ENST00000439110 327 ntBASIC4.26□□□□□ -1.73
CBX1P83916 SUMO2P1-206ENST00000445436 284 ntBASIC4.26□□□□□ -1.73
CBX1P83916 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.26□□□□□ -1.73
CBX1P83916 BNIP3P41-201ENST00000503774 571 ntBASIC4.26□□□□□ -1.73
CBX1P83916 MTCO1P31-201ENST00000506355 492 ntBASIC4.26□□□□□ -1.73
CBX1P83916 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.26□□□□□ -1.73
CBX1P83916 AC007016.1-201ENST00000512110 244 ntBASIC4.26□□□□□ -1.73
CBX1P83916 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CBX1P83916 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.26□□□□□ -1.73
CBX1P83916 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.26□□□□□ -1.73
CBX1P83916 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.26□□□□□ -1.73
CBX1P83916 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.26□□□□□ -1.73
CBX1P83916 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CBX1P83916 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.26□□□□□ -1.73
CBX1P83916 MIR1269B-201ENST00000580405 75 ntBASIC4.26□□□□□ -1.73
CBX1P83916 MIR4425-201ENST00000580572 84 ntBASIC4.26□□□□□ -1.73
CBX1P83916 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.26□□□□□ -1.73
CBX1P83916 MIR4512-201ENST00000583257 77 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms