Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AC134698.5-201ENST00000519444 336 ntBASIC4.37□□□□□ -1.71
SEC61A1P61619 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC4.37□□□□□ -1.71
SEC61A1P61619 AP002812.4-201ENST00000532139 286 ntBASIC4.37□□□□□ -1.71
SEC61A1P61619 AC024940.3-201ENST00000538551 316 ntBASIC4.37□□□□□ -1.71
SEC61A1P61619 AC010198.2-201ENST00000550612 259 ntBASIC4.37□□□□□ -1.71
SEC61A1P61619 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.37□□□□□ -1.71
SEC61A1P61619 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
SEC61A1P61619 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC4.37□□□□□ -1.71
SEC61A1P61619 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC4.37□□□□□ -1.71
SEC61A1P61619 AC135628.1-201ENST00000568867 534 ntBASIC4.37□□□□□ -1.71
SEC61A1P61619 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.37□□□□□ -1.71
SEC61A1P61619 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SEC61A1P61619 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
SEC61A1P61619 AC006116.3-201ENST00000592968 361 ntBASIC4.37□□□□□ -1.71
SEC61A1P61619 MRPS35P3-201ENST00000603189 709 ntBASIC4.37□□□□□ -1.71
SEC61A1P61619 AC087763.1-201ENST00000603391 286 ntBASIC4.37□□□□□ -1.71
SEC61A1P61619 AC026585.1-201ENST00000619582 524 ntBASIC4.37□□□□□ -1.71
SEC61A1P61619 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.37□□□□□ -1.71
SEC61A1P61619 AF001550.2-201ENST00000636643 217 ntBASIC4.37□□□□□ -1.71
SEC61A1P61619 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.37□□□□□ -1.71
SEC61A1P61619 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
SEC61A1P61619 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
SEC61A1P61619 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SEC61A1P61619 MAPK10-286ENST00000641208 8747 ntBASIC4.37□□□□□ -1.71
SEC61A1P61619 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SEC61A1P61619 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SEC61A1P61619 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
SEC61A1P61619 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
SEC61A1P61619 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
SEC61A1P61619 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.37□□□□□ -1.71
SEC61A1P61619 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SEC61A1P61619 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SEC61A1P61619 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
SEC61A1P61619 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SEC61A1P61619 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
SEC61A1P61619 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SEC61A1P61619 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SEC61A1P61619 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
SEC61A1P61619 FAM3C2-201ENST00000312214 681 ntBASIC4.36□□□□□ -1.71
SEC61A1P61619 AC008549.2-201ENST00000333482 706 ntBASIC4.36□□□□□ -1.71
SEC61A1P61619 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
SEC61A1P61619 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
SEC61A1P61619 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.36□□□□□ -1.71
SEC61A1P61619 MIR600-201ENST00000385007 98 ntBASIC4.36□□□□□ -1.71
SEC61A1P61619 RSL24D1P4-201ENST00000400938 484 ntBASIC4.36□□□□□ -1.71
SEC61A1P61619 AL079342.2-201ENST00000403367 482 ntBASIC4.36□□□□□ -1.71
SEC61A1P61619 AL035079.1-201ENST00000405210 287 ntBASIC4.36□□□□□ -1.71
SEC61A1P61619 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.36□□□□□ -1.71
SEC61A1P61619 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.36□□□□□ -1.71
SEC61A1P61619 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.36□□□□□ -1.71
SEC61A1P61619 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.36□□□□□ -1.71
SEC61A1P61619 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.36□□□□□ -1.71
SEC61A1P61619 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC4.36□□□□□ -1.71
SEC61A1P61619 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.36□□□□□ -1.71
SEC61A1P61619 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.36□□□□□ -1.71
SEC61A1P61619 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.36□□□□□ -1.71
SEC61A1P61619 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.36□□□□□ -1.71
SEC61A1P61619 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.36□□□□□ -1.71
SEC61A1P61619 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.36□□□□□ -1.71
SEC61A1P61619 DNAJC19P8-201ENST00000452887 259 ntBASIC4.36□□□□□ -1.71
SEC61A1P61619 AC092647.2-201ENST00000452998 253 ntBASIC4.36□□□□□ -1.71
SEC61A1P61619 ANKRD26P4-201ENST00000455755 950 ntBASIC4.36□□□□□ -1.71
SEC61A1P61619 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC4.36□□□□□ -1.71
SEC61A1P61619 MTND2P28-201ENST00000457540 1044 ntBASIC4.36□□□□□ -1.71
SEC61A1P61619 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.36□□□□□ -1.71
SEC61A1P61619 RPL21P6-201ENST00000479171 504 ntBASIC4.36□□□□□ -1.71
SEC61A1P61619 RPL23AP37-201ENST00000479658 549 ntBASIC4.36□□□□□ -1.71
SEC61A1P61619 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.36□□□□□ -1.71
SEC61A1P61619 AC021146.8-201ENST00000507455 733 ntBASIC4.36□□□□□ -1.71
SEC61A1P61619 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.36□□□□□ -1.71
SEC61A1P61619 GTF2F2P1-201ENST00000511083 675 ntBASIC4.36□□□□□ -1.71
SEC61A1P61619 OR5BM1P-201ENST00000512021 366 ntBASIC4.36□□□□□ -1.71
SEC61A1P61619 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.36□□□□□ -1.71
SEC61A1P61619 C1GALT1P3-201ENST00000522049 819 ntBASIC4.36□□□□□ -1.71
SEC61A1P61619 AP003033.1-201ENST00000527244 415 ntBASIC4.36□□□□□ -1.71
SEC61A1P61619 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SEC61A1P61619 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SEC61A1P61619 ELOCP32-201ENST00000548625 324 ntBASIC4.36□□□□□ -1.71
SEC61A1P61619 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
SEC61A1P61619 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.36□□□□□ -1.71
SEC61A1P61619 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.36□□□□□ -1.71
SEC61A1P61619 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.36□□□□□ -1.71
SEC61A1P61619 AC027104.1-201ENST00000563702 681 ntBASIC4.36□□□□□ -1.71
SEC61A1P61619 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.36□□□□□ -1.71
SEC61A1P61619 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SEC61A1P61619 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.36□□□□□ -1.71
SEC61A1P61619 RN7SL176P-201ENST00000580352 264 ntBASIC4.36□□□□□ -1.71
SEC61A1P61619 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.36□□□□□ -1.71
SEC61A1P61619 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.36□□□□□ -1.71
SEC61A1P61619 AP001542.2-201ENST00000593141 364 ntBASIC4.36□□□□□ -1.71
SEC61A1P61619 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.36□□□□□ -1.71
SEC61A1P61619 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.36□□□□□ -1.71
SEC61A1P61619 AC068790.2-201ENST00000602601 557 ntBASIC4.36□□□□□ -1.71
SEC61A1P61619 AC095055.1-201ENST00000603472 1113 ntBASIC4.36□□□□□ -1.71
SEC61A1P61619 AC087283.1-201ENST00000604029 1074 ntBASIC4.36□□□□□ -1.71
SEC61A1P61619 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
SEC61A1P61619 STMN1P1-201ENST00000617809 440 ntBASIC4.36□□□□□ -1.71
SEC61A1P61619 AC074140.1-201ENST00000621617 208 ntBASIC4.36□□□□□ -1.71
SEC61A1P61619 AC024595.1-201ENST00000623088 387 ntBASIC4.36□□□□□ -1.71
SEC61A1P61619 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms