Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 AC008013.2-202ENST00000637965 364 ntBASIC3.84□□□□□ -1.79
CLDN18P56856 AC007529.1-201ENST00000418574 2178 ntBASIC3.84□□□□□ -1.79
CLDN18P56856 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
CLDN18P56856 AL353743.4-201ENST00000422653 1547 ntBASIC3.84□□□□□ -1.8
CLDN18P56856 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
CLDN18P56856 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
CLDN18P56856 RNF6P1-201ENST00000444889 1784 ntBASIC3.84□□□□□ -1.8
CLDN18P56856 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.84□□□□□ -1.8
CLDN18P56856 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CLDN18P56856 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.83□□□□□ -1.8
CLDN18P56856 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLDN18P56856 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CLDN18P56856 RNU1-20P-201ENST00000363314 162 ntBASIC3.83□□□□□ -1.8
CLDN18P56856 RNU6-185P-201ENST00000384421 107 ntBASIC3.83□□□□□ -1.8
CLDN18P56856 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CLDN18P56856 SNORD66.1-201ENST00000391230 76 ntBASIC3.83□□□□□ -1.8
CLDN18P56856 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLDN18P56856 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CLDN18P56856 RNA5SP239-201ENST00000410218 129 ntBASIC3.83□□□□□ -1.8
CLDN18P56856 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.83□□□□□ -1.8
CLDN18P56856 CEACAMP8-201ENST00000413902 580 ntBASIC3.83□□□□□ -1.8
CLDN18P56856 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.83□□□□□ -1.8
CLDN18P56856 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.83□□□□□ -1.8
CLDN18P56856 AC068587.1-201ENST00000483613 781 ntBASIC3.83□□□□□ -1.8
CLDN18P56856 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.83□□□□□ -1.8
CLDN18P56856 RNU6-491P-201ENST00000516099 110 ntBASIC3.83□□□□□ -1.8
CLDN18P56856 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.83□□□□□ -1.8
CLDN18P56856 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.83□□□□□ -1.8
CLDN18P56856 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.83□□□□□ -1.8
CLDN18P56856 AC006064.5-201ENST00000541782 248 ntBASIC3.83□□□□□ -1.8
CLDN18P56856 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.83□□□□□ -1.8
CLDN18P56856 AL049870.4-201ENST00000555741 486 ntBASIC3.83□□□□□ -1.8
CLDN18P56856 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.83□□□□□ -1.8
CLDN18P56856 AC008759.1-201ENST00000589783 983 ntBASIC3.83□□□□□ -1.8
CLDN18P56856 ABI1P1-201ENST00000603375 1120 ntBASIC3.83□□□□□ -1.8
CLDN18P56856 AC084036.1-201ENST00000609190 508 ntBASIC3.83□□□□□ -1.8
CLDN18P56856 AC023043.4-201ENST00000612081 449 ntBASIC3.83□□□□□ -1.8
CLDN18P56856 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CLDN18P56856 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLDN18P56856 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CLDN18P56856 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CLDN18P56856 AC011266.1-201ENST00000624119 3569 ntBASIC3.82□□□□□ -1.8
CLDN18P56856 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLDN18P56856 AL133412.1-201ENST00000380194 2992 ntBASIC3.82□□□□□ -1.8
CLDN18P56856 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.82□□□□□ -1.8
CLDN18P56856 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLDN18P56856 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLDN18P56856 MFSD8-220ENST00000641243 1422 ntBASIC3.82□□□□□ -1.8
CLDN18P56856 AL121657.1-201ENST00000327215 531 ntBASIC3.82□□□□□ -1.8
CLDN18P56856 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CLDN18P56856 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CLDN18P56856 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.82□□□□□ -1.8
CLDN18P56856 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.82□□□□□ -1.8
CLDN18P56856 MIR124-3-201ENST00000384866 87 ntBASIC3.82□□□□□ -1.8
CLDN18P56856 MIR3074-201ENST00000384885 81 ntBASIC3.82□□□□□ -1.8
CLDN18P56856 RPS26P8-201ENST00000393490 348 ntBASIC3.82□□□□□ -1.8
CLDN18P56856 AL356806.1-201ENST00000422524 916 ntBASIC3.82□□□□□ -1.8
CLDN18P56856 COX6CP15-201ENST00000426313 211 ntBASIC3.82□□□□□ -1.8
CLDN18P56856 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.82□□□□□ -1.8
CLDN18P56856 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.82□□□□□ -1.8
CLDN18P56856 ELOCP11-201ENST00000436690 332 ntBASIC3.82□□□□□ -1.8
CLDN18P56856 AL606490.8-201ENST00000441624 319 ntBASIC3.82□□□□□ -1.8
CLDN18P56856 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.82□□□□□ -1.8
CLDN18P56856 ELOCP16-201ENST00000444494 332 ntBASIC3.82□□□□□ -1.8
CLDN18P56856 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC3.82□□□□□ -1.8
CLDN18P56856 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
CLDN18P56856 AC012158.1-204ENST00000483430 465 ntBASIC3.82□□□□□ -1.8
CLDN18P56856 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC3.82□□□□□ -1.8
CLDN18P56856 AC104164.2-201ENST00000496953 495 ntBASIC3.82□□□□□ -1.8
CLDN18P56856 RPS27AP13-201ENST00000498403 237 ntBASIC3.82□□□□□ -1.8
CLDN18P56856 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.82□□□□□ -1.8
CLDN18P56856 TOMM20P2-201ENST00000540082 421 ntBASIC3.82□□□□□ -1.8
CLDN18P56856 AC023158.1-201ENST00000561632 1025 ntBASIC3.82□□□□□ -1.8
CLDN18P56856 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.82□□□□□ -1.8
CLDN18P56856 AC115085.1-201ENST00000588924 229 ntBASIC3.82□□□□□ -1.8
CLDN18P56856 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.82□□□□□ -1.8
CLDN18P56856 AC022387.2-201ENST00000604050 448 ntBASIC3.82□□□□□ -1.8
CLDN18P56856 AC092653.1-201ENST00000608509 531 ntBASIC3.82□□□□□ -1.8
CLDN18P56856 AC004825.2-201ENST00000616634 455 ntBASIC3.82□□□□□ -1.8
CLDN18P56856 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.82□□□□□ -1.8
CLDN18P56856 AC068831.8-201ENST00000620171 435 ntBASIC3.82□□□□□ -1.8
CLDN18P56856 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CLDN18P56856 AC019278.1-201ENST00000623516 479 ntBASIC3.82□□□□□ -1.8
CLDN18P56856 MIR492-201ENST00000638676 116 ntBASIC3.82□□□□□ -1.8
CLDN18P56856 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.82□□□□□ -1.8
CLDN18P56856 AC119674.1-220ENST00000641502 1048 ntBASIC3.82□□□□□ -1.8
CLDN18P56856 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
CLDN18P56856 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLDN18P56856 NOL8P1-201ENST00000508336 3529 ntBASIC3.82□□□□□ -1.8
CLDN18P56856 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLDN18P56856 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLDN18P56856 AL139811.1-201ENST00000424779 2299 ntBASIC3.81□□□□□ -1.8
CLDN18P56856 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CLDN18P56856 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.81□□□□□ -1.8
CLDN18P56856 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLDN18P56856 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
CLDN18P56856 RNU6-152P-201ENST00000384037 107 ntBASIC3.81□□□□□ -1.8
CLDN18P56856 RNA5SP372-201ENST00000390836 115 ntBASIC3.81□□□□□ -1.8
CLDN18P56856 RN7SKP177-201ENST00000410567 355 ntBASIC3.81□□□□□ -1.8
CLDN18P56856 RN7SKP182-201ENST00000410772 298 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 143.6 ms