Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
EPHB3P54753 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
EPHB3P54753 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
EPHB3P54753 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
EPHB3P54753 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.8□□□□□ -1.48
EPHB3P54753 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
EPHB3P54753 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
EPHB3P54753 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
EPHB3P54753 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.79□□□□□ -1.48
EPHB3P54753 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
EPHB3P54753 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
EPHB3P54753 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
EPHB3P54753 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.79□□□□□ -1.48
EPHB3P54753 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
EPHB3P54753 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.79□□□□□ -1.48
EPHB3P54753 PABPC1P9-201ENST00000426076 1612 ntBASIC5.79□□□□□ -1.48
EPHB3P54753 METTL21EP-201ENST00000298105 713 ntBASIC5.79□□□□□ -1.48
EPHB3P54753 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
EPHB3P54753 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
EPHB3P54753 RNU1-59P-201ENST00000364829 162 ntBASIC5.79□□□□□ -1.48
EPHB3P54753 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
EPHB3P54753 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC5.79□□□□□ -1.48
EPHB3P54753 AC096921.1-201ENST00000411661 375 ntBASIC5.79□□□□□ -1.48
EPHB3P54753 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC5.79□□□□□ -1.48
EPHB3P54753 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.79□□□□□ -1.48
EPHB3P54753 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
EPHB3P54753 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC5.79□□□□□ -1.48
EPHB3P54753 PTMAP6-201ENST00000439110 327 ntBASIC5.79□□□□□ -1.48
EPHB3P54753 UBE2V1P3-201ENST00000439651 417 ntBASIC5.79□□□□□ -1.48
EPHB3P54753 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.79□□□□□ -1.48
EPHB3P54753 REG1CP-206ENST00000447469 496 ntBASIC5.79□□□□□ -1.48
EPHB3P54753 PSPHP1-201ENST00000450062 261 ntBASIC5.79□□□□□ -1.48
EPHB3P54753 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC5.79□□□□□ -1.48
EPHB3P54753 AC005532.2-201ENST00000467154 373 ntBASIC5.79□□□□□ -1.48
EPHB3P54753 RPL23AP37-201ENST00000479658 549 ntBASIC5.79□□□□□ -1.48
EPHB3P54753 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
EPHB3P54753 ACTG1P13-201ENST00000486987 1043 ntBASIC5.79□□□□□ -1.48
EPHB3P54753 RPL32P9-201ENST00000487963 407 ntBASIC5.79□□□□□ -1.48
EPHB3P54753 RPL7P24-201ENST00000493052 752 ntBASIC5.79□□□□□ -1.48
EPHB3P54753 RPL15P21-201ENST00000495592 567 ntBASIC5.79□□□□□ -1.48
EPHB3P54753 MTCO3P9-201ENST00000506989 781 ntBASIC5.79□□□□□ -1.48
EPHB3P54753 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.79□□□□□ -1.48
EPHB3P54753 AC010342.1-201ENST00000514047 877 ntBASIC5.79□□□□□ -1.48
EPHB3P54753 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.79□□□□□ -1.48
EPHB3P54753 MTCO1P35-201ENST00000515270 228 ntBASIC5.79□□□□□ -1.48
EPHB3P54753 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.79□□□□□ -1.48
EPHB3P54753 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.79□□□□□ -1.48
EPHB3P54753 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC5.79□□□□□ -1.48
EPHB3P54753 HMGB1P40-201ENST00000525121 540 ntBASIC5.79□□□□□ -1.48
EPHB3P54753 AC137627.1-201ENST00000545761 289 ntBASIC5.79□□□□□ -1.48
EPHB3P54753 GTF2IP22-201ENST00000554443 182 ntBASIC5.79□□□□□ -1.48
EPHB3P54753 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
EPHB3P54753 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.79□□□□□ -1.48
EPHB3P54753 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.79□□□□□ -1.48
EPHB3P54753 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.79□□□□□ -1.48
EPHB3P54753 AC103792.1-201ENST00000603591 919 ntBASIC5.79□□□□□ -1.48
EPHB3P54753 SEPT7P9-203ENST00000604116 343 ntBASIC5.79□□□□□ -1.48
EPHB3P54753 AP005137.2-201ENST00000609238 400 ntBASIC5.79□□□□□ -1.48
EPHB3P54753 U1.25-201ENST00000614085 162 ntBASIC5.79□□□□□ -1.48
EPHB3P54753 AC091834.1-201ENST00000614543 472 ntBASIC5.79□□□□□ -1.48
EPHB3P54753 AC009159.1-201ENST00000618386 642 ntBASIC5.79□□□□□ -1.48
EPHB3P54753 U1.31-201ENST00000620022 160 ntBASIC5.79□□□□□ -1.48
EPHB3P54753 MIR6730-201ENST00000622213 67 ntBASIC5.79□□□□□ -1.48
EPHB3P54753 FRG1KP-201ENST00000623592 341 ntBASIC5.79□□□□□ -1.48
EPHB3P54753 AP003122.6-201ENST00000623831 495 ntBASIC5.79□□□□□ -1.48
EPHB3P54753 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
EPHB3P54753 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
EPHB3P54753 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
EPHB3P54753 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
EPHB3P54753 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
EPHB3P54753 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
EPHB3P54753 AC144833.1-201ENST00000567953 4089 ntBASIC5.79□□□□□ -1.48
EPHB3P54753 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.78□□□□□ -1.48
EPHB3P54753 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.78□□□□□ -1.48
EPHB3P54753 AC068769.1-201ENST00000474767 2426 ntBASIC5.78□□□□□ -1.48
EPHB3P54753 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
EPHB3P54753 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
EPHB3P54753 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
EPHB3P54753 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
EPHB3P54753 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
EPHB3P54753 RNU6-660P-201ENST00000364566 109 ntBASIC5.78□□□□□ -1.48
EPHB3P54753 Y_RNA.302-201ENST00000364997 102 ntBASIC5.78□□□□□ -1.48
EPHB3P54753 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
EPHB3P54753 AC005042.1-201ENST00000393397 800 ntBASIC5.78□□□□□ -1.48
EPHB3P54753 CYCSP45-201ENST00000402289 315 ntBASIC5.78□□□□□ -1.48
EPHB3P54753 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
EPHB3P54753 PTP4A1P1-201ENST00000420539 515 ntBASIC5.78□□□□□ -1.48
EPHB3P54753 AC007161.1-204ENST00000423039 460 ntBASIC5.78□□□□□ -1.48
EPHB3P54753 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
EPHB3P54753 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.78□□□□□ -1.48
EPHB3P54753 DSTNP5-201ENST00000427921 523 ntBASIC5.78□□□□□ -1.48
EPHB3P54753 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.78□□□□□ -1.48
EPHB3P54753 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.78□□□□□ -1.48
EPHB3P54753 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC5.78□□□□□ -1.48
EPHB3P54753 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
EPHB3P54753 USP24P1-201ENST00000433802 779 ntBASIC5.78□□□□□ -1.48
EPHB3P54753 OR52B5P-201ENST00000435337 951 ntBASIC5.78□□□□□ -1.48
EPHB3P54753 AC234064.1-201ENST00000436312 247 ntBASIC5.78□□□□□ -1.48
EPHB3P54753 GAPDHP58-201ENST00000438477 1006 ntBASIC5.78□□□□□ -1.48
EPHB3P54753 AC073614.1-201ENST00000438690 650 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms