Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 LINC01091-204ENST00000515769 2204 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
ATN1P54259 FHL1-204ENST00000370683 2565 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
ATN1P54259 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
ATN1P54259 DDX24-211ENST00000640432 2580 ntTSL 5 BASIC8.13□□□□□ -1.11
ATN1P54259 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC8.13□□□□□ -1.11
ATN1P54259 LRRC37A12P-201ENST00000454917 1801 ntBASIC8.13□□□□□ -1.11
ATN1P54259 RRM2-201ENST00000304567 3271 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
ATN1P54259 RNPC3-208ENST00000533099 3641 ntAPPRIS P2 TSL 5 BASIC8.12□□□□□ -1.11
ATN1P54259 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC8.12□□□□□ -1.11
ATN1P54259 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC8.12□□□□□ -1.11
ATN1P54259 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
ATN1P54259 MAPK10-329ENST00000641555 2656 ntBASIC8.12□□□□□ -1.11
ATN1P54259 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
ATN1P54259 AC027097.2-201ENST00000588925 1976 ntTSL 2 BASIC8.12□□□□□ -1.11
ATN1P54259 THAP12P4-201ENST00000528321 2266 ntBASIC8.12□□□□□ -1.11
ATN1P54259 RECQL-203ENST00000421138 2572 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
ATN1P54259 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
ATN1P54259 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
ATN1P54259 SNORD94-201ENST00000386037 137 ntBASIC8.12□□□□□ -1.11
ATN1P54259 AC016769.2-201ENST00000414815 475 ntBASIC8.12□□□□□ -1.11
ATN1P54259 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC8.12□□□□□ -1.11
ATN1P54259 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC8.12□□□□□ -1.11
ATN1P54259 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC8.12□□□□□ -1.11
ATN1P54259 SS18L2P1-201ENST00000445923 213 ntBASIC8.12□□□□□ -1.11
ATN1P54259 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC8.12□□□□□ -1.11
ATN1P54259 CBX1P2-201ENST00000453841 458 ntBASIC8.12□□□□□ -1.11
ATN1P54259 RPL23AP81-201ENST00000455252 467 ntBASIC8.12□□□□□ -1.11
ATN1P54259 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC8.12□□□□□ -1.11
ATN1P54259 CYCSP34-201ENST00000458172 304 ntBASIC8.12□□□□□ -1.11
ATN1P54259 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC8.12□□□□□ -1.11
ATN1P54259 RN7SL325P-201ENST00000460434 283 ntBASIC8.12□□□□□ -1.11
ATN1P54259 CYCTP-201ENST00000504253 315 ntBASIC8.12□□□□□ -1.11
ATN1P54259 AC104806.1-201ENST00000508720 308 ntBASIC8.12□□□□□ -1.11
ATN1P54259 AC096754.1-201ENST00000508904 818 ntBASIC8.12□□□□□ -1.11
ATN1P54259 AC012560.1-203ENST00000510550 595 ntTSL 4 BASIC8.12□□□□□ -1.11
ATN1P54259 RN7SKP70-201ENST00000516655 271 ntBASIC8.12□□□□□ -1.11
ATN1P54259 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC8.12□□□□□ -1.11
ATN1P54259 AC027288.2-201ENST00000553028 243 ntBASIC8.12□□□□□ -1.11
ATN1P54259 SS18L2P2-201ENST00000583960 235 ntBASIC8.12□□□□□ -1.11
ATN1P54259 RPSAP66-201ENST00000592196 606 ntBASIC8.12□□□□□ -1.11
ATN1P54259 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC8.12□□□□□ -1.11
ATN1P54259 AC124319.3-201ENST00000616832 526 ntBASIC8.12□□□□□ -1.11
ATN1P54259 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC8.12□□□□□ -1.11
ATN1P54259 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
ATN1P54259 CCNB2-205ENST00000621385 2503 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
ATN1P54259 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
ATN1P54259 TMCC3-203ENST00000551457 4361 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
ATN1P54259 PHF21A-201ENST00000323180 3675 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
ATN1P54259 IKZF5-201ENST00000368886 4555 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
ATN1P54259 RC3H1-203ENST00000367696 11261 ntAPPRIS P3 TSL 5 BASIC8.12□□□□□ -1.11
ATN1P54259 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
ATN1P54259 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC8.12□□□□□ -1.11
ATN1P54259 CPM-202ENST00000546373 2116 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
ATN1P54259 WDR75-201ENST00000314761 2701 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
ATN1P54259 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
ATN1P54259 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
ATN1P54259 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
ATN1P54259 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
ATN1P54259 AP4S1-211ENST00000616371 4595 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
ATN1P54259 AC008725.1-201ENST00000605123 2263 ntBASIC8.12□□□□□ -1.11
ATN1P54259 ADAM3A-202ENST00000460383 2528 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
ATN1P54259 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
ATN1P54259 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC8.11□□□□□ -1.11
ATN1P54259 KCNH7-202ENST00000332142 4113 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
ATN1P54259 DGKB-205ENST00000406247 3257 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
ATN1P54259 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
ATN1P54259 ZNF512-201ENST00000355467 3541 ntAPPRIS P2 TSL 2 BASIC8.11□□□□□ -1.11
ATN1P54259 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
ATN1P54259 DLG2-218ENST00000524982 2872 ntTSL 2 BASIC8.11□□□□□ -1.11
ATN1P54259 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC8.11□□□□□ -1.11
ATN1P54259 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC8.11□□□□□ -1.11
ATN1P54259 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
ATN1P54259 Y_RNA.488-201ENST00000384403 102 ntBASIC8.11□□□□□ -1.11
ATN1P54259 RNA5SP105-201ENST00000391123 113 ntBASIC8.11□□□□□ -1.11
ATN1P54259 MIR1272-201ENST00000408106 129 ntBASIC8.11□□□□□ -1.11
ATN1P54259 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC8.11□□□□□ -1.11
ATN1P54259 AC093414.1-201ENST00000434712 514 ntBASIC8.11□□□□□ -1.11
ATN1P54259 RPL36AP6-201ENST00000435770 321 ntBASIC8.11□□□□□ -1.11
ATN1P54259 AC009518.3-201ENST00000438972 253 ntBASIC8.11□□□□□ -1.11
ATN1P54259 AC087884.1-201ENST00000469738 328 ntBASIC8.11□□□□□ -1.11
ATN1P54259 AC087385.1-201ENST00000475062 312 ntBASIC8.11□□□□□ -1.11
ATN1P54259 RN7SL143P-201ENST00000496780 297 ntBASIC8.11□□□□□ -1.11
ATN1P54259 AC097462.2-201ENST00000504623 481 ntBASIC8.11□□□□□ -1.11
ATN1P54259 FTH1P21-201ENST00000512179 511 ntBASIC8.11□□□□□ -1.11
ATN1P54259 RNU6-323P-201ENST00000521915 107 ntBASIC8.11□□□□□ -1.11
ATN1P54259 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC8.11□□□□□ -1.11
ATN1P54259 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC8.11□□□□□ -1.11
ATN1P54259 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC8.11□□□□□ -1.11
ATN1P54259 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC8.11□□□□□ -1.11
ATN1P54259 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC8.11□□□□□ -1.11
ATN1P54259 MIR4271-201ENST00000582451 67 ntBASIC8.11□□□□□ -1.11
ATN1P54259 AL451044.1-201ENST00000604867 238 ntBASIC8.11□□□□□ -1.11
ATN1P54259 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC8.11□□□□□ -1.11
ATN1P54259 AC008626.2-201ENST00000624425 248 ntBASIC8.11□□□□□ -1.11
ATN1P54259 AP000843.1-201ENST00000624880 701 ntBASIC8.11□□□□□ -1.11
ATN1P54259 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC8.11□□□□□ -1.11
ATN1P54259 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
ATN1P54259 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
ATN1P54259 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC8.11□□□□□ -1.11
ATN1P54259 MYO6-207ENST00000615563 4026 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms