Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 RPS4XP18-201ENST00000495480 763 ntBASIC4.87□□□□□ -1.63
CLCN3P51790 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.87□□□□□ -1.63
CLCN3P51790 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC4.87□□□□□ -1.63
CLCN3P51790 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.87□□□□□ -1.63
CLCN3P51790 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CLCN3P51790 NPM1P6-201ENST00000521088 871 ntBASIC4.87□□□□□ -1.63
CLCN3P51790 MTND2P32-201ENST00000521584 1038 ntBASIC4.87□□□□□ -1.63
CLCN3P51790 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.87□□□□□ -1.63
CLCN3P51790 TOMM20P2-201ENST00000540082 421 ntBASIC4.87□□□□□ -1.63
CLCN3P51790 AC011611.5-201ENST00000552477 578 ntBASIC4.87□□□□□ -1.63
CLCN3P51790 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.87□□□□□ -1.63
CLCN3P51790 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.87□□□□□ -1.63
CLCN3P51790 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.87□□□□□ -1.63
CLCN3P51790 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CLCN3P51790 ZNF92P3-201ENST00000596594 954 ntBASIC4.87□□□□□ -1.63
CLCN3P51790 AC079587.1-201ENST00000603846 277 ntBASIC4.87□□□□□ -1.63
CLCN3P51790 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.87□□□□□ -1.63
CLCN3P51790 MIR8069-1-201ENST00000616627 86 ntBASIC4.87□□□□□ -1.63
CLCN3P51790 STMN1P1-201ENST00000617809 440 ntBASIC4.87□□□□□ -1.63
CLCN3P51790 uc_338.13-201ENST00000618243 179 ntBASIC4.87□□□□□ -1.63
CLCN3P51790 AL512427.1-201ENST00000618593 349 ntBASIC4.87□□□□□ -1.63
CLCN3P51790 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.87□□□□□ -1.63
CLCN3P51790 MIR8069-2-201ENST00000621412 86 ntBASIC4.87□□□□□ -1.63
CLCN3P51790 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.87□□□□□ -1.63
CLCN3P51790 AC099654.9-201ENST00000637055 678 ntBASIC4.87□□□□□ -1.63
CLCN3P51790 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.87□□□□□ -1.63
CLCN3P51790 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.87□□□□□ -1.63
CLCN3P51790 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CLCN3P51790 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLCN3P51790 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
CLCN3P51790 MFSD8-242ENST00000641690 4199 ntBASIC4.86□□□□□ -1.63
CLCN3P51790 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLCN3P51790 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.86□□□□□ -1.63
CLCN3P51790 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLCN3P51790 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.86□□□□□ -1.63
CLCN3P51790 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.86□□□□□ -1.63
CLCN3P51790 RNA5SP366-201ENST00000365454 123 ntBASIC4.86□□□□□ -1.63
CLCN3P51790 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC4.86□□□□□ -1.63
CLCN3P51790 MIR3065-201ENST00000390137 79 ntBASIC4.86□□□□□ -1.63
CLCN3P51790 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CLCN3P51790 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC4.86□□□□□ -1.63
CLCN3P51790 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.86□□□□□ -1.63
CLCN3P51790 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.86□□□□□ -1.63
CLCN3P51790 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CLCN3P51790 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.86□□□□□ -1.63
CLCN3P51790 AC004854.1-201ENST00000440356 349 ntBASIC4.86□□□□□ -1.63
CLCN3P51790 MTND1P26-201ENST00000440488 538 ntBASIC4.86□□□□□ -1.63
CLCN3P51790 CASP3P1-201ENST00000446037 609 ntBASIC4.86□□□□□ -1.63
CLCN3P51790 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.86□□□□□ -1.63
CLCN3P51790 AC098826.2-201ENST00000452011 651 ntBASIC4.86□□□□□ -1.63
CLCN3P51790 RNA5SP103-201ENST00000459503 118 ntBASIC4.86□□□□□ -1.63
CLCN3P51790 UQCRHP4-201ENST00000471686 272 ntBASIC4.86□□□□□ -1.63
CLCN3P51790 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.86□□□□□ -1.63
CLCN3P51790 WDR78-207ENST00000488333 613 ntTSL 3 BASIC4.86□□□□□ -1.63
CLCN3P51790 HMGB1P38-201ENST00000490557 577 ntBASIC4.86□□□□□ -1.63
CLCN3P51790 AC091167.1-201ENST00000492017 396 ntBASIC4.86□□□□□ -1.63
CLCN3P51790 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.86□□□□□ -1.63
CLCN3P51790 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.86□□□□□ -1.63
CLCN3P51790 RNA5SP446-201ENST00000515955 82 ntBASIC4.86□□□□□ -1.63
CLCN3P51790 SNORA31.9-201ENST00000516429 84 ntBASIC4.86□□□□□ -1.63
CLCN3P51790 MRPL49P2-201ENST00000521066 465 ntBASIC4.86□□□□□ -1.63
CLCN3P51790 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.86□□□□□ -1.63
CLCN3P51790 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.86□□□□□ -1.63
CLCN3P51790 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
CLCN3P51790 MTND1P24-201ENST00000552175 861 ntBASIC4.86□□□□□ -1.63
CLCN3P51790 POLR2KP1-201ENST00000553226 168 ntBASIC4.86□□□□□ -1.63
CLCN3P51790 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.86□□□□□ -1.63
CLCN3P51790 AC093591.2-201ENST00000565254 3843 ntBASIC4.86□□□□□ -1.63
CLCN3P51790 AP000919.1-202ENST00000581139 1264 ntBASIC4.86□□□□□ -1.63
CLCN3P51790 IMMP1LP1-201ENST00000605170 488 ntBASIC4.86□□□□□ -1.63
CLCN3P51790 AC099785.1-201ENST00000605697 437 ntBASIC4.86□□□□□ -1.63
CLCN3P51790 AC008966.2-201ENST00000606157 453 ntBASIC4.86□□□□□ -1.63
CLCN3P51790 AC096586.1-201ENST00000610267 561 ntBASIC4.86□□□□□ -1.63
CLCN3P51790 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.86□□□□□ -1.63
CLCN3P51790 AC234782.5-201ENST00000617723 324 ntBASIC4.86□□□□□ -1.63
CLCN3P51790 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
CLCN3P51790 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC4.86□□□□□ -1.63
CLCN3P51790 AC068724.3-201ENST00000625906 87 ntBASIC4.86□□□□□ -1.63
CLCN3P51790 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.86□□□□□ -1.63
CLCN3P51790 AC140479.6-201ENST00000633535 357 ntBASIC4.86□□□□□ -1.63
CLCN3P51790 AC099654.8-201ENST00000637757 681 ntBASIC4.86□□□□□ -1.63
CLCN3P51790 AC096656.1-201ENST00000623826 1364 ntBASIC4.86□□□□□ -1.63
CLCN3P51790 MFSD8-220ENST00000641243 1422 ntBASIC4.86□□□□□ -1.63
CLCN3P51790 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CLCN3P51790 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
CLCN3P51790 AL158163.1-201ENST00000603915 1649 ntBASIC4.86□□□□□ -1.63
CLCN3P51790 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CLCN3P51790 TTC39DP-201ENST00000416781 1688 ntBASIC4.86□□□□□ -1.63
CLCN3P51790 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.86□□□□□ -1.63
CLCN3P51790 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CLCN3P51790 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLCN3P51790 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.85□□□□□ -1.63
CLCN3P51790 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLCN3P51790 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLCN3P51790 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLCN3P51790 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLCN3P51790 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLCN3P51790 AL121657.1-201ENST00000327215 531 ntBASIC4.85□□□□□ -1.63
CLCN3P51790 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CLCN3P51790 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms