Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AC010095.1-201ENST00000443543 144 ntBASIC3.98□□□□□ -1.77
BRCA2P51587 RPL32P28-201ENST00000443577 397 ntBASIC3.98□□□□□ -1.77
BRCA2P51587 AL590240.3-201ENST00000621416 943 ntBASIC3.98□□□□□ -1.77
BRCA2P51587 AC015813.6-201ENST00000624409 5808 ntBASIC3.98□□□□□ -1.77
BRCA2P51587 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
BRCA2P51587 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
BRCA2P51587 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
BRCA2P51587 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
BRCA2P51587 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
BRCA2P51587 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
BRCA2P51587 HSPD1P11-201ENST00000508643 1702 ntBASIC3.97□□□□□ -1.77
BRCA2P51587 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC3.97□□□□□ -1.77
BRCA2P51587 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.97□□□□□ -1.77
BRCA2P51587 AC009506.2-201ENST00000420635 840 ntBASIC3.97□□□□□ -1.77
BRCA2P51587 AC108941.1-201ENST00000502853 530 ntBASIC3.97□□□□□ -1.77
BRCA2P51587 LARP7P3-201ENST00000579888 337 ntBASIC3.97□□□□□ -1.77
BRCA2P51587 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC3.97□□□□□ -1.77
BRCA2P51587 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
BRCA2P51587 AL136360.1-201ENST00000503377 1900 ntBASIC3.97□□□□□ -1.77
BRCA2P51587 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
BRCA2P51587 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
BRCA2P51587 IGKV2-26-201ENST00000518305 343 ntBASIC3.97□□□□□ -1.77
BRCA2P51587 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
BRCA2P51587 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.97□□□□□ -1.77
BRCA2P51587 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC3.97□□□□□ -1.77
BRCA2P51587 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
BRCA2P51587 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
BRCA2P51587 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
BRCA2P51587 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC3.97□□□□□ -1.77
BRCA2P51587 MAP1B-201ENST00000296755 12036 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
BRCA2P51587 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
BRCA2P51587 RNU6-304P-201ENST00000364855 107 ntBASIC3.96□□□□□ -1.77
BRCA2P51587 MIR1261-201ENST00000408659 82 ntBASIC3.96□□□□□ -1.77
BRCA2P51587 RN7SKP222-201ENST00000410651 315 ntBASIC3.96□□□□□ -1.77
BRCA2P51587 RN7SKP97-201ENST00000410966 333 ntBASIC3.96□□□□□ -1.77
BRCA2P51587 AC010740.1-201ENST00000417035 684 ntBASIC3.96□□□□□ -1.77
BRCA2P51587 UBTFL3-201ENST00000418934 1024 ntBASIC3.96□□□□□ -1.77
BRCA2P51587 HSPE1P27-201ENST00000430808 296 ntBASIC3.96□□□□□ -1.77
BRCA2P51587 UBTFL6-201ENST00000477929 1024 ntBASIC3.96□□□□□ -1.77
BRCA2P51587 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.96□□□□□ -1.77
BRCA2P51587 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.96□□□□□ -1.77
BRCA2P51587 Y_RNA.676-201ENST00000516393 96 ntBASIC3.96□□□□□ -1.77
BRCA2P51587 OR2AS2P-201ENST00000606902 342 ntBASIC3.96□□□□□ -1.77
BRCA2P51587 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC3.96□□□□□ -1.77
BRCA2P51587 AC015922.4-201ENST00000612568 690 ntBASIC3.96□□□□□ -1.77
BRCA2P51587 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
BRCA2P51587 TFDP2-224ENST00000499676 9335 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
BRCA2P51587 AL645937.1-201ENST00000641739 1652 ntBASIC3.96□□□□□ -1.78
BRCA2P51587 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
BRCA2P51587 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.96□□□□□ -1.78
BRCA2P51587 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
BRCA2P51587 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.96□□□□□ -1.78
BRCA2P51587 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.96□□□□□ -1.78
BRCA2P51587 RPL31P61-201ENST00000496160 376 ntBASIC3.96□□□□□ -1.78
BRCA2P51587 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC3.96□□□□□ -1.78
BRCA2P51587 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
BRCA2P51587 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
BRCA2P51587 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
BRCA2P51587 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC3.96□□□□□ -1.78
BRCA2P51587 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
BRCA2P51587 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
BRCA2P51587 NPM1P25-201ENST00000429734 854 ntBASIC3.96□□□□□ -1.78
BRCA2P51587 RPL7P38-201ENST00000488396 739 ntBASIC3.96□□□□□ -1.78
BRCA2P51587 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.96□□□□□ -1.78
BRCA2P51587 RNVU1-4-201ENST00000612985 164 ntBASIC3.96□□□□□ -1.78
BRCA2P51587 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
BRCA2P51587 AC067852.3-201ENST00000589177 561 ntBASIC3.95□□□□□ -1.78
BRCA2P51587 BMS1P21-201ENST00000634565 365 ntBASIC3.95□□□□□ -1.78
BRCA2P51587 AC127502.3-201ENST00000636170 1206 ntBASIC3.95□□□□□ -1.78
BRCA2P51587 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
BRCA2P51587 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
BRCA2P51587 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
BRCA2P51587 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC3.95□□□□□ -1.78
BRCA2P51587 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
BRCA2P51587 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
BRCA2P51587 FTX-215ENST00000638681 9771 ntTSL 5 BASIC3.95□□□□□ -1.78
BRCA2P51587 ATP6V1G1P6-201ENST00000504007 334 ntBASIC3.95□□□□□ -1.78
BRCA2P51587 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.95□□□□□ -1.78
BRCA2P51587 AL162274.2-201ENST00000614406 332 ntBASIC3.95□□□□□ -1.78
BRCA2P51587 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.95□□□□□ -1.78
BRCA2P51587 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
BRCA2P51587 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC3.95□□□□□ -1.78
BRCA2P51587 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.95□□□□□ -1.78
BRCA2P51587 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
BRCA2P51587 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
BRCA2P51587 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
BRCA2P51587 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
BRCA2P51587 Z99755.1-201ENST00000414048 380 ntBASIC3.95□□□□□ -1.78
BRCA2P51587 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.95□□□□□ -1.78
BRCA2P51587 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.95□□□□□ -1.78
BRCA2P51587 RN7SL432P-201ENST00000484057 298 ntBASIC3.95□□□□□ -1.78
BRCA2P51587 VN1R104P-201ENST00000505115 1009 ntBASIC3.95□□□□□ -1.78
BRCA2P51587 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
BRCA2P51587 AL512310.1-201ENST00000548639 172 ntBASIC3.95□□□□□ -1.78
BRCA2P51587 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.95□□□□□ -1.78
BRCA2P51587 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
BRCA2P51587 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
BRCA2P51587 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
BRCA2P51587 RPL21P7-201ENST00000557463 483 ntBASIC3.94□□□□□ -1.78
BRCA2P51587 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms