Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AL691517.1-201ENST00000440833 1235 ntBASIC4.72□□□□□ -1.65
NEDD4P46934 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.72□□□□□ -1.65
NEDD4P46934 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC4.72□□□□□ -1.65
NEDD4P46934 AC098583.1-201ENST00000480875 255 ntBASIC4.72□□□□□ -1.65
NEDD4P46934 RWDD4P1-201ENST00000488019 565 ntBASIC4.72□□□□□ -1.65
NEDD4P46934 AC090543.1-201ENST00000492168 485 ntBASIC4.72□□□□□ -1.65
NEDD4P46934 RPL31P61-201ENST00000496160 376 ntBASIC4.72□□□□□ -1.65
NEDD4P46934 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.72□□□□□ -1.65
NEDD4P46934 AC016550.3-201ENST00000515706 767 ntBASIC4.72□□□□□ -1.65
NEDD4P46934 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.72□□□□□ -1.65
NEDD4P46934 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NEDD4P46934 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.72□□□□□ -1.65
NEDD4P46934 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
NEDD4P46934 YPEL5P3-201ENST00000547227 352 ntBASIC4.72□□□□□ -1.65
NEDD4P46934 DUX4L52-201ENST00000549363 777 ntBASIC4.72□□□□□ -1.65
NEDD4P46934 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.72□□□□□ -1.65
NEDD4P46934 MIR3908-201ENST00000579798 126 ntBASIC4.72□□□□□ -1.65
NEDD4P46934 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.72□□□□□ -1.65
NEDD4P46934 AC092474.3-201ENST00000603022 568 ntBASIC4.72□□□□□ -1.65
NEDD4P46934 AL159169.2-201ENST00000610061 1269 ntBASIC4.72□□□□□ -1.65
NEDD4P46934 MIR6500-201ENST00000622700 86 ntBASIC4.72□□□□□ -1.65
NEDD4P46934 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.72□□□□□ -1.65
NEDD4P46934 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NEDD4P46934 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
NEDD4P46934 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NEDD4P46934 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.72□□□□□ -1.65
NEDD4P46934 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
NEDD4P46934 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.72□□□□□ -1.65
NEDD4P46934 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NEDD4P46934 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
NEDD4P46934 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NEDD4P46934 FAM91A3P-201ENST00000456826 2544 ntBASIC4.72□□□□□ -1.65
NEDD4P46934 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.72□□□□□ -1.65
NEDD4P46934 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.72□□□□□ -1.65
NEDD4P46934 AC000123.3-201ENST00000624029 4975 ntBASIC4.72□□□□□ -1.65
NEDD4P46934 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NEDD4P46934 RNU6-249P-201ENST00000363016 102 ntBASIC4.72□□□□□ -1.65
NEDD4P46934 AL672167.2-201ENST00000377164 879 ntBASIC4.72□□□□□ -1.65
NEDD4P46934 SNORA40.4-201ENST00000390971 128 ntBASIC4.72□□□□□ -1.65
NEDD4P46934 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.72□□□□□ -1.65
NEDD4P46934 NANOGP6-201ENST00000429190 847 ntBASIC4.72□□□□□ -1.65
NEDD4P46934 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC4.72□□□□□ -1.65
NEDD4P46934 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.72□□□□□ -1.65
NEDD4P46934 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NEDD4P46934 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.72□□□□□ -1.65
NEDD4P46934 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.72□□□□□ -1.65
NEDD4P46934 AL353718.1-201ENST00000451028 517 ntBASIC4.72□□□□□ -1.65
NEDD4P46934 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.72□□□□□ -1.65
NEDD4P46934 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC4.72□□□□□ -1.65
NEDD4P46934 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.72□□□□□ -1.65
NEDD4P46934 SSR3-208ENST00000496050 579 ntTSL 4 BASIC4.72□□□□□ -1.65
NEDD4P46934 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC4.72□□□□□ -1.65
NEDD4P46934 FABP5P6-201ENST00000510588 409 ntBASIC4.72□□□□□ -1.65
NEDD4P46934 RFPL4AP5-201ENST00000514977 504 ntBASIC4.72□□□□□ -1.65
NEDD4P46934 HNRNPKP5-201ENST00000515300 253 ntBASIC4.72□□□□□ -1.65
NEDD4P46934 RN7SKP34-201ENST00000516142 244 ntBASIC4.72□□□□□ -1.65
NEDD4P46934 AC067904.2-201ENST00000517322 1283 ntBASIC4.72□□□□□ -1.65
NEDD4P46934 IGHV3-63-201ENST00000518422 341 ntBASIC4.72□□□□□ -1.65
NEDD4P46934 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.72□□□□□ -1.65
NEDD4P46934 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
NEDD4P46934 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.72□□□□□ -1.65
NEDD4P46934 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.72□□□□□ -1.65
NEDD4P46934 AC084824.1-201ENST00000550917 1005 ntBASIC4.72□□□□□ -1.65
NEDD4P46934 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.72□□□□□ -1.65
NEDD4P46934 MTND2P13-201ENST00000577438 1039 ntBASIC4.72□□□□□ -1.65
NEDD4P46934 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.72□□□□□ -1.65
NEDD4P46934 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.72□□□□□ -1.65
NEDD4P46934 AL158062.1-201ENST00000619632 745 ntBASIC4.72□□□□□ -1.65
NEDD4P46934 AC073530.2-201ENST00000623987 261 ntBASIC4.72□□□□□ -1.65
NEDD4P46934 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.72□□□□□ -1.65
NEDD4P46934 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.72□□□□□ -1.65
NEDD4P46934 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
NEDD4P46934 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
NEDD4P46934 IQCB2P-201ENST00000401788 1633 ntBASIC4.71□□□□□ -1.66
NEDD4P46934 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NEDD4P46934 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.71□□□□□ -1.66
NEDD4P46934 RN7SKP227-201ENST00000364445 330 ntBASIC4.71□□□□□ -1.66
NEDD4P46934 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
NEDD4P46934 RNA5SP105-201ENST00000391123 113 ntBASIC4.71□□□□□ -1.66
NEDD4P46934 MIR1193-201ENST00000408109 78 ntBASIC4.71□□□□□ -1.66
NEDD4P46934 AC002524.1-201ENST00000411687 547 ntBASIC4.71□□□□□ -1.66
NEDD4P46934 AL445213.1-201ENST00000412589 747 ntBASIC4.71□□□□□ -1.66
NEDD4P46934 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.71□□□□□ -1.66
NEDD4P46934 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.71□□□□□ -1.66
NEDD4P46934 GSTA7P-201ENST00000438425 448 ntBASIC4.71□□□□□ -1.66
NEDD4P46934 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.71□□□□□ -1.66
NEDD4P46934 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.71□□□□□ -1.66
NEDD4P46934 AL451050.1-201ENST00000450126 415 ntBASIC4.71□□□□□ -1.66
NEDD4P46934 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.71□□□□□ -1.66
NEDD4P46934 FABP3P2-201ENST00000453169 399 ntBASIC4.71□□□□□ -1.66
NEDD4P46934 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.71□□□□□ -1.66
NEDD4P46934 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.71□□□□□ -1.66
NEDD4P46934 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.71□□□□□ -1.66
NEDD4P46934 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NEDD4P46934 MIR2116-201ENST00000517221 80 ntBASIC4.71□□□□□ -1.66
NEDD4P46934 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.71□□□□□ -1.66
NEDD4P46934 AC087369.1-201ENST00000520775 996 ntBASIC4.71□□□□□ -1.66
NEDD4P46934 OR8R1P-201ENST00000543943 764 ntBASIC4.71□□□□□ -1.66
NEDD4P46934 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.71□□□□□ -1.66
NEDD4P46934 SS18L2P2-201ENST00000583960 235 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms