Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 AC110775.1-201ENST00000513721 462 ntBASIC4.41□□□□□ -1.7
CASQ1P31415 SNORD116-30-201ENST00000516468 85 ntBASIC4.41□□□□□ -1.7
CASQ1P31415 MTND5P21-201ENST00000531961 522 ntBASIC4.41□□□□□ -1.7
CASQ1P31415 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.41□□□□□ -1.7
CASQ1P31415 ZNF192P1-203ENST00000565888 810 ntBASIC4.41□□□□□ -1.7
CASQ1P31415 RPL23AP87-202ENST00000573039 466 ntBASIC4.41□□□□□ -1.7
CASQ1P31415 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.41□□□□□ -1.7
CASQ1P31415 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.41□□□□□ -1.7
CASQ1P31415 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.41□□□□□ -1.7
CASQ1P31415 AC006065.5-201ENST00000623427 349 ntBASIC4.41□□□□□ -1.7
CASQ1P31415 AC020978.9-201ENST00000624380 1141 ntBASIC4.41□□□□□ -1.7
CASQ1P31415 AC244205.2-202ENST00000635781 342 ntBASIC4.41□□□□□ -1.7
CASQ1P31415 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.41□□□□□ -1.7
CASQ1P31415 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.41□□□□□ -1.7
CASQ1P31415 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CASQ1P31415 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CASQ1P31415 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
CASQ1P31415 AP001148.1-201ENST00000624124 2359 ntBASIC4.41□□□□□ -1.7
CASQ1P31415 AC109780.1-201ENST00000451768 1344 ntBASIC4.41□□□□□ -1.7
CASQ1P31415 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CASQ1P31415 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CASQ1P31415 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CASQ1P31415 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.4□□□□□ -1.7
CASQ1P31415 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
CASQ1P31415 RAD17P1-201ENST00000418130 2042 ntBASIC4.4□□□□□ -1.7
CASQ1P31415 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
CASQ1P31415 RNU1-18P-201ENST00000363062 164 ntBASIC4.4□□□□□ -1.71
CASQ1P31415 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CASQ1P31415 HMGN2P8-201ENST00000391458 268 ntBASIC4.4□□□□□ -1.71
CASQ1P31415 PTMAP5-201ENST00000393073 333 ntBASIC4.4□□□□□ -1.71
CASQ1P31415 RN7SKP213-201ENST00000410746 298 ntBASIC4.4□□□□□ -1.71
CASQ1P31415 RN7SKP106-201ENST00000410832 272 ntBASIC4.4□□□□□ -1.71
CASQ1P31415 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.4□□□□□ -1.71
CASQ1P31415 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.4□□□□□ -1.71
CASQ1P31415 MTND2P15-201ENST00000418575 892 ntBASIC4.4□□□□□ -1.71
CASQ1P31415 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.4□□□□□ -1.71
CASQ1P31415 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.4□□□□□ -1.71
CASQ1P31415 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.4□□□□□ -1.71
CASQ1P31415 AL512326.1-201ENST00000443050 721 ntBASIC4.4□□□□□ -1.71
CASQ1P31415 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.4□□□□□ -1.71
CASQ1P31415 RPL31P20-201ENST00000449593 360 ntBASIC4.4□□□□□ -1.71
CASQ1P31415 AC011005.3-201ENST00000491624 395 ntBASIC4.4□□□□□ -1.71
CASQ1P31415 AL133372.1-201ENST00000493565 745 ntBASIC4.4□□□□□ -1.71
CASQ1P31415 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.4□□□□□ -1.71
CASQ1P31415 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.4□□□□□ -1.71
CASQ1P31415 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.4□□□□□ -1.71
CASQ1P31415 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.4□□□□□ -1.71
CASQ1P31415 AC090246.1-201ENST00000616499 426 ntBASIC4.4□□□□□ -1.71
CASQ1P31415 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.4□□□□□ -1.71
CASQ1P31415 U6.98-201ENST00000637157 84 ntBASIC4.4□□□□□ -1.71
CASQ1P31415 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CASQ1P31415 MAPK10-373ENST00000641983 6772 ntBASIC4.4□□□□□ -1.71
CASQ1P31415 LINC00561-201ENST00000565815 2738 ntBASIC4.4□□□□□ -1.71
CASQ1P31415 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
CASQ1P31415 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CASQ1P31415 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CASQ1P31415 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CASQ1P31415 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.39□□□□□ -1.71
CASQ1P31415 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.39□□□□□ -1.71
CASQ1P31415 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CASQ1P31415 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.39□□□□□ -1.71
CASQ1P31415 U1.1-201ENST00000384101 164 ntBASIC4.39□□□□□ -1.71
CASQ1P31415 MIR298-201ENST00000401212 88 ntBASIC4.39□□□□□ -1.71
CASQ1P31415 SNORA11F-201ENST00000408237 128 ntBASIC4.39□□□□□ -1.71
CASQ1P31415 AC004987.3-201ENST00000413879 771 ntBASIC4.39□□□□□ -1.71
CASQ1P31415 P2RY10P2-201ENST00000416730 913 ntBASIC4.39□□□□□ -1.71
CASQ1P31415 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.39□□□□□ -1.71
CASQ1P31415 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.39□□□□□ -1.71
CASQ1P31415 CBX1P4-201ENST00000439415 457 ntBASIC4.39□□□□□ -1.71
CASQ1P31415 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.39□□□□□ -1.71
CASQ1P31415 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.39□□□□□ -1.71
CASQ1P31415 AL162591.2-201ENST00000449634 317 ntBASIC4.39□□□□□ -1.71
CASQ1P31415 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.39□□□□□ -1.71
CASQ1P31415 RPL36AP13-201ENST00000457490 317 ntBASIC4.39□□□□□ -1.71
CASQ1P31415 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.39□□□□□ -1.71
CASQ1P31415 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.39□□□□□ -1.71
CASQ1P31415 AC091042.1-201ENST00000579213 173 ntBASIC4.39□□□□□ -1.71
CASQ1P31415 AC012417.1-201ENST00000582307 1039 ntBASIC4.39□□□□□ -1.71
CASQ1P31415 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.39□□□□□ -1.71
CASQ1P31415 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.39□□□□□ -1.71
CASQ1P31415 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CASQ1P31415 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.39□□□□□ -1.71
CASQ1P31415 AC121761.2-201ENST00000617300 689 ntBASIC4.39□□□□□ -1.71
CASQ1P31415 uc_338.13-201ENST00000618243 179 ntBASIC4.39□□□□□ -1.71
CASQ1P31415 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.39□□□□□ -1.71
CASQ1P31415 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.39□□□□□ -1.71
CASQ1P31415 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.39□□□□□ -1.71
CASQ1P31415 AL592494.2-201ENST00000425455 1548 ntBASIC4.39□□□□□ -1.71
CASQ1P31415 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CASQ1P31415 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CASQ1P31415 PRO1804-201ENST00000623780 2050 ntBASIC4.39□□□□□ -1.71
CASQ1P31415 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CASQ1P31415 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.38□□□□□ -1.71
CASQ1P31415 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CASQ1P31415 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CASQ1P31415 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CASQ1P31415 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CASQ1P31415 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.38□□□□□ -1.71
CASQ1P31415 RNU6-618P-201ENST00000363518 112 ntBASIC4.38□□□□□ -1.71
CASQ1P31415 MIR621-201ENST00000384919 96 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms