Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 MIR3662-201ENST00000637030 95 ntBASIC6.92□□□□□ -1.3
RFX1P22670 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
RFX1P22670 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RFX1P22670 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC6.92□□□□□ -1.3
RFX1P22670 AC092447.10-201ENST00000620607 1652 ntBASIC6.92□□□□□ -1.3
RFX1P22670 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RFX1P22670 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RFX1P22670 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
RFX1P22670 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
RFX1P22670 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
RFX1P22670 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RFX1P22670 THUMPD3P1-201ENST00000506556 1480 ntBASIC6.92□□□□□ -1.3
RFX1P22670 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RFX1P22670 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RFX1P22670 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RFX1P22670 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RFX1P22670 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RFX1P22670 MAPK10-261ENST00000641050 3109 ntBASIC6.91□□□□□ -1.3
RFX1P22670 NAP1L4P1-201ENST00000319092 1157 ntBASIC6.91□□□□□ -1.3
RFX1P22670 SNORD16-201ENST00000362803 99 ntBASIC6.91□□□□□ -1.3
RFX1P22670 RNA5SP478-201ENST00000364657 115 ntBASIC6.91□□□□□ -1.3
RFX1P22670 MT-TD-201ENST00000387419 68 ntBASIC6.91□□□□□ -1.3
RFX1P22670 RPL12P23-201ENST00000405880 490 ntBASIC6.91□□□□□ -1.3
RFX1P22670 AC116036.1-201ENST00000412199 367 ntBASIC6.91□□□□□ -1.3
RFX1P22670 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.91□□□□□ -1.3
RFX1P22670 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.91□□□□□ -1.3
RFX1P22670 SNRPEP10-201ENST00000420249 274 ntBASIC6.91□□□□□ -1.3
RFX1P22670 AC083862.1-201ENST00000427378 1242 ntBASIC6.91□□□□□ -1.3
RFX1P22670 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC6.91□□□□□ -1.3
RFX1P22670 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RFX1P22670 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC6.91□□□□□ -1.3
RFX1P22670 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.91□□□□□ -1.3
RFX1P22670 AL022237.1-201ENST00000446663 358 ntBASIC6.91□□□□□ -1.3
RFX1P22670 AC243772.1-201ENST00000451620 410 ntBASIC6.91□□□□□ -1.3
RFX1P22670 AC009963.3-201ENST00000458090 486 ntBASIC6.91□□□□□ -1.3
RFX1P22670 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC6.91□□□□□ -1.3
RFX1P22670 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC6.91□□□□□ -1.3
RFX1P22670 AC114786.4-201ENST00000508771 728 ntBASIC6.91□□□□□ -1.3
RFX1P22670 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.91□□□□□ -1.3
RFX1P22670 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC6.91□□□□□ -1.3
RFX1P22670 Vault.3-201ENST00000516676 95 ntBASIC6.91□□□□□ -1.3
RFX1P22670 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.91□□□□□ -1.3
RFX1P22670 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.91□□□□□ -1.3
RFX1P22670 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.91□□□□□ -1.3
RFX1P22670 CYCSP25-201ENST00000525280 316 ntBASIC6.91□□□□□ -1.3
RFX1P22670 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.91□□□□□ -1.3
RFX1P22670 CBX3P5-201ENST00000552017 521 ntBASIC6.91□□□□□ -1.3
RFX1P22670 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RFX1P22670 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC6.91□□□□□ -1.3
RFX1P22670 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.91□□□□□ -1.3
RFX1P22670 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.91□□□□□ -1.3
RFX1P22670 H3F3BP2-201ENST00000583907 357 ntBASIC6.91□□□□□ -1.3
RFX1P22670 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.91□□□□□ -1.3
RFX1P22670 AC126175.1-201ENST00000617041 758 ntBASIC6.91□□□□□ -1.3
RFX1P22670 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.91□□□□□ -1.3
RFX1P22670 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.91□□□□□ -1.3
RFX1P22670 AC010149.2-201ENST00000637608 315 ntBASIC6.91□□□□□ -1.3
RFX1P22670 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RFX1P22670 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RFX1P22670 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
RFX1P22670 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.91□□□□□ -1.3
RFX1P22670 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC6.91□□□□□ -1.3
RFX1P22670 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.91□□□□□ -1.3
RFX1P22670 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.91□□□□□ -1.3
RFX1P22670 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.91□□□□□ -1.3
RFX1P22670 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RFX1P22670 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.91□□□□□ -1.3
RFX1P22670 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
RFX1P22670 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RFX1P22670 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC6.91□□□□□ -1.3
RFX1P22670 AC104966.1-201ENST00000467010 1464 ntBASIC6.91□□□□□ -1.3
RFX1P22670 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.91□□□□□ -1.3
RFX1P22670 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RFX1P22670 MTND5P28-201ENST00000438005 1594 ntBASIC6.91□□□□□ -1.3
RFX1P22670 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
RFX1P22670 MTND5P17-201ENST00000418405 1603 ntBASIC6.9□□□□□ -1.3
RFX1P22670 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
RFX1P22670 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
RFX1P22670 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
RFX1P22670 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RFX1P22670 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
RFX1P22670 AL442128.2-201ENST00000620246 1824 ntBASIC6.9□□□□□ -1.3
RFX1P22670 AC011504.1-201ENST00000623331 4103 ntBASIC6.9□□□□□ -1.3
RFX1P22670 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RFX1P22670 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
RFX1P22670 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
RFX1P22670 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
RFX1P22670 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
RFX1P22670 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RFX1P22670 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RFX1P22670 LCN1P2-201ENST00000372030 223 ntBASIC6.9□□□□□ -1.3
RFX1P22670 AC004386.1-201ENST00000393214 761 ntBASIC6.9□□□□□ -1.3
RFX1P22670 RNA5SP251-201ENST00000410614 137 ntBASIC6.9□□□□□ -1.3
RFX1P22670 JKAMPP1-201ENST00000413804 919 ntBASIC6.9□□□□□ -1.3
RFX1P22670 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.9□□□□□ -1.3
RFX1P22670 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.9□□□□□ -1.3
RFX1P22670 OR51AB1P-201ENST00000429046 620 ntBASIC6.9□□□□□ -1.3
RFX1P22670 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC6.9□□□□□ -1.3
RFX1P22670 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
RFX1P22670 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms