Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC006499.2-201ENST00000513470 337 ntBASIC6.67□□□□□ -1.34
ERCC3P19447 ZNF705CP-201ENST00000530515 889 ntBASIC6.67□□□□□ -1.34
ERCC3P19447 CYCSP28-201ENST00000534284 321 ntBASIC6.67□□□□□ -1.34
ERCC3P19447 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC6.67□□□□□ -1.34
ERCC3P19447 OR11J2P-201ENST00000555298 907 ntBASIC6.67□□□□□ -1.34
ERCC3P19447 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC6.67□□□□□ -1.34
ERCC3P19447 AL136363.2-201ENST00000604173 851 ntBASIC6.67□□□□□ -1.34
ERCC3P19447 RNU6-156P-201ENST00000621869 107 ntBASIC6.67□□□□□ -1.34
ERCC3P19447 AC093591.3-201ENST00000634516 308 ntBASIC6.67□□□□□ -1.34
ERCC3P19447 U6.101-201ENST00000637707 76 ntBASIC6.67□□□□□ -1.34
ERCC3P19447 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
ERCC3P19447 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.67□□□□□ -1.34
ERCC3P19447 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
ERCC3P19447 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
ERCC3P19447 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.67□□□□□ -1.34
ERCC3P19447 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
ERCC3P19447 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
ERCC3P19447 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.66□□□□□ -1.34
ERCC3P19447 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
ERCC3P19447 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
ERCC3P19447 ANKRD62P1-201ENST00000434304 1623 ntBASIC6.66□□□□□ -1.34
ERCC3P19447 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
ERCC3P19447 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
ERCC3P19447 AC117529.2-201ENST00000512159 2068 ntBASIC6.66□□□□□ -1.34
ERCC3P19447 AL161756.3-201ENST00000641216 2071 ntBASIC6.66□□□□□ -1.34
ERCC3P19447 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
ERCC3P19447 U3.7-201ENST00000363668 216 ntBASIC6.66□□□□□ -1.34
ERCC3P19447 SNORA58B-201ENST00000364259 136 ntBASIC6.66□□□□□ -1.34
ERCC3P19447 OR6C69P-201ENST00000394268 893 ntBASIC6.66□□□□□ -1.34
ERCC3P19447 AL390316.1-201ENST00000406279 553 ntBASIC6.66□□□□□ -1.34
ERCC3P19447 MAST4-207ENST00000407621 559 ntTSL 2 BASIC6.66□□□□□ -1.34
ERCC3P19447 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC6.66□□□□□ -1.34
ERCC3P19447 VTI1BP4-201ENST00000427516 527 ntBASIC6.66□□□□□ -1.34
ERCC3P19447 NMNAT1P2-201ENST00000435192 860 ntBASIC6.66□□□□□ -1.34
ERCC3P19447 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC6.66□□□□□ -1.34
ERCC3P19447 LSM1P1-201ENST00000438629 273 ntBASIC6.66□□□□□ -1.34
ERCC3P19447 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.66□□□□□ -1.34
ERCC3P19447 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC6.66□□□□□ -1.34
ERCC3P19447 MTCYBP1-201ENST00000454315 1119 ntBASIC6.66□□□□□ -1.34
ERCC3P19447 AC011225.1-201ENST00000457751 369 ntBASIC6.66□□□□□ -1.34
ERCC3P19447 COPS8P2-201ENST00000473228 627 ntBASIC6.66□□□□□ -1.34
ERCC3P19447 MTND6P6-201ENST00000478031 263 ntBASIC6.66□□□□□ -1.34
ERCC3P19447 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC6.66□□□□□ -1.34
ERCC3P19447 AC021678.3-201ENST00000517893 476 ntBASIC6.66□□□□□ -1.34
ERCC3P19447 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.66□□□□□ -1.34
ERCC3P19447 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC6.66□□□□□ -1.34
ERCC3P19447 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC6.66□□□□□ -1.34
ERCC3P19447 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
ERCC3P19447 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC6.66□□□□□ -1.34
ERCC3P19447 IMMP1LP3-201ENST00000604197 224 ntBASIC6.66□□□□□ -1.34
ERCC3P19447 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC6.66□□□□□ -1.34
ERCC3P19447 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.66□□□□□ -1.34
ERCC3P19447 AC016769.4-201ENST00000616893 535 ntBASIC6.66□□□□□ -1.34
ERCC3P19447 AC018445.2-201ENST00000622987 260 ntBASIC6.66□□□□□ -1.34
ERCC3P19447 AP000648.2-201ENST00000624182 404 ntBASIC6.66□□□□□ -1.34
ERCC3P19447 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC6.66□□□□□ -1.34
ERCC3P19447 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
ERCC3P19447 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.66□□□□□ -1.34
ERCC3P19447 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
ERCC3P19447 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
ERCC3P19447 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
ERCC3P19447 TEX21P-201ENST00000447107 1476 ntBASIC6.66□□□□□ -1.34
ERCC3P19447 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.66□□□□□ -1.34
ERCC3P19447 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
ERCC3P19447 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
ERCC3P19447 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
ERCC3P19447 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
ERCC3P19447 AC010329.2-201ENST00000595195 2737 ntBASIC6.65□□□□□ -1.34
ERCC3P19447 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
ERCC3P19447 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.65□□□□□ -1.34
ERCC3P19447 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.65□□□□□ -1.34
ERCC3P19447 THAP12P9-201ENST00000503971 2360 ntBASIC6.65□□□□□ -1.34
ERCC3P19447 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
ERCC3P19447 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.65□□□□□ -1.34
ERCC3P19447 AL159987.1-201ENST00000347911 293 ntBASIC6.65□□□□□ -1.34
ERCC3P19447 RNU4-2-201ENST00000365668 141 ntBASIC6.65□□□□□ -1.34
ERCC3P19447 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
ERCC3P19447 EIF5P1-201ENST00000400019 1231 ntBASIC6.65□□□□□ -1.34
ERCC3P19447 DPPA2P3-201ENST00000411853 655 ntBASIC6.65□□□□□ -1.34
ERCC3P19447 AL133384.1-201ENST00000412744 351 ntBASIC6.65□□□□□ -1.34
ERCC3P19447 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.65□□□□□ -1.34
ERCC3P19447 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.65□□□□□ -1.34
ERCC3P19447 AC016027.5-201ENST00000427227 210 ntBASIC6.65□□□□□ -1.34
ERCC3P19447 AC104651.1-201ENST00000427559 735 ntBASIC6.65□□□□□ -1.34
ERCC3P19447 C8orf59P1-201ENST00000429930 303 ntBASIC6.65□□□□□ -1.34
ERCC3P19447 AL731534.1-201ENST00000434711 269 ntBASIC6.65□□□□□ -1.34
ERCC3P19447 RPL37P21-201ENST00000435890 276 ntBASIC6.65□□□□□ -1.34
ERCC3P19447 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC6.65□□□□□ -1.34
ERCC3P19447 AL357520.1-201ENST00000441557 453 ntBASIC6.65□□□□□ -1.34
ERCC3P19447 MTCO2P3-201ENST00000442543 421 ntBASIC6.65□□□□□ -1.34
ERCC3P19447 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC6.65□□□□□ -1.34
ERCC3P19447 RPL7P22-201ENST00000466005 733 ntBASIC6.65□□□□□ -1.34
ERCC3P19447 AC087879.1-201ENST00000474343 374 ntBASIC6.65□□□□□ -1.34
ERCC3P19447 PFN1P6-201ENST00000476786 399 ntBASIC6.65□□□□□ -1.34
ERCC3P19447 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.65□□□□□ -1.34
ERCC3P19447 TMEM251P1-201ENST00000503717 318 ntBASIC6.65□□□□□ -1.34
ERCC3P19447 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.65□□□□□ -1.34
ERCC3P19447 MTND4LP18-201ENST00000526864 291 ntBASIC6.65□□□□□ -1.34
ERCC3P19447 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
ERCC3P19447 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms