Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC5.58□□□□□ -1.52
COL6A2P12110 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.58□□□□□ -1.52
COL6A2P12110 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC5.58□□□□□ -1.52
COL6A2P12110 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.58□□□□□ -1.52
COL6A2P12110 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.58□□□□□ -1.52
COL6A2P12110 AP005205.1-201ENST00000563503 508 ntBASIC5.58□□□□□ -1.52
COL6A2P12110 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.58□□□□□ -1.52
COL6A2P12110 MIR4502-201ENST00000580432 81 ntBASIC5.58□□□□□ -1.52
COL6A2P12110 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.58□□□□□ -1.52
COL6A2P12110 AC008507.3-201ENST00000585753 472 ntBASIC5.58□□□□□ -1.52
COL6A2P12110 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5.58□□□□□ -1.52
COL6A2P12110 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.58□□□□□ -1.52
COL6A2P12110 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.58□□□□□ -1.52
COL6A2P12110 AF250324.2-201ENST00000608299 610 ntBASIC5.58□□□□□ -1.52
COL6A2P12110 AL354760.1-201ENST00000608357 643 ntBASIC5.58□□□□□ -1.52
COL6A2P12110 AC010632.3-201ENST00000611377 369 ntBASIC5.58□□□□□ -1.52
COL6A2P12110 AC090517.2-201ENST00000614966 680 ntBASIC5.58□□□□□ -1.52
COL6A2P12110 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COL6A2P12110 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
COL6A2P12110 AC073593.1-201ENST00000624500 411 ntBASIC5.58□□□□□ -1.52
COL6A2P12110 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.58□□□□□ -1.52
COL6A2P12110 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL6A2P12110 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
COL6A2P12110 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL6A2P12110 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
COL6A2P12110 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL6A2P12110 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
COL6A2P12110 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.58□□□□□ -1.52
COL6A2P12110 AC093775.1-201ENST00000624154 1868 ntBASIC5.58□□□□□ -1.52
COL6A2P12110 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COL6A2P12110 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.58□□□□□ -1.52
COL6A2P12110 AC104966.1-201ENST00000467010 1464 ntBASIC5.58□□□□□ -1.52
COL6A2P12110 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.58□□□□□ -1.52
COL6A2P12110 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL6A2P12110 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
COL6A2P12110 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL6A2P12110 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL6A2P12110 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
COL6A2P12110 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
COL6A2P12110 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
COL6A2P12110 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.57□□□□□ -1.52
COL6A2P12110 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
COL6A2P12110 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.57□□□□□ -1.52
COL6A2P12110 RNU6-251P-201ENST00000363235 104 ntBASIC5.57□□□□□ -1.52
COL6A2P12110 RNU5F-7P-201ENST00000363696 115 ntBASIC5.57□□□□□ -1.52
COL6A2P12110 RNA5SP500-201ENST00000364486 119 ntBASIC5.57□□□□□ -1.52
COL6A2P12110 RNU5A-6P-201ENST00000384136 116 ntBASIC5.57□□□□□ -1.52
COL6A2P12110 MIR181A1-201ENST00000385026 110 ntBASIC5.57□□□□□ -1.52
COL6A2P12110 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.57□□□□□ -1.52
COL6A2P12110 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
COL6A2P12110 MTCO3P1-205ENST00000422088 832 ntBASIC5.57□□□□□ -1.52
COL6A2P12110 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC5.57□□□□□ -1.52
COL6A2P12110 OR8F1P-201ENST00000425243 930 ntBASIC5.57□□□□□ -1.52
COL6A2P12110 AC073335.1-201ENST00000427776 363 ntBASIC5.57□□□□□ -1.52
COL6A2P12110 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC5.57□□□□□ -1.52
COL6A2P12110 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.57□□□□□ -1.52
COL6A2P12110 BMS1P19-201ENST00000433925 393 ntBASIC5.57□□□□□ -1.52
COL6A2P12110 AL831737.1-201ENST00000441288 271 ntBASIC5.57□□□□□ -1.52
COL6A2P12110 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC5.57□□□□□ -1.52
COL6A2P12110 AC098824.1-201ENST00000453565 980 ntBASIC5.57□□□□□ -1.52
COL6A2P12110 AZGP1P2-201ENST00000454506 345 ntBASIC5.57□□□□□ -1.52
COL6A2P12110 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC5.57□□□□□ -1.52
COL6A2P12110 RPL7P24-201ENST00000493052 752 ntBASIC5.57□□□□□ -1.52
COL6A2P12110 AC009120.1-201ENST00000493458 473 ntBASIC5.57□□□□□ -1.52
COL6A2P12110 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC5.57□□□□□ -1.52
COL6A2P12110 AC008549.1-201ENST00000512900 643 ntBASIC5.57□□□□□ -1.52
COL6A2P12110 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC5.57□□□□□ -1.52
COL6A2P12110 HSD3BP3-201ENST00000514706 994 ntBASIC5.57□□□□□ -1.52
COL6A2P12110 RNU6-583P-201ENST00000516012 92 ntBASIC5.57□□□□□ -1.52
COL6A2P12110 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.57□□□□□ -1.52
COL6A2P12110 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.57□□□□□ -1.52
COL6A2P12110 AP000648.1-201ENST00000529682 397 ntBASIC5.57□□□□□ -1.52
COL6A2P12110 HMGB1P42-201ENST00000532126 553 ntBASIC5.57□□□□□ -1.52
COL6A2P12110 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.57□□□□□ -1.52
COL6A2P12110 AC084121.1-201ENST00000533882 835 ntBASIC5.57□□□□□ -1.52
COL6A2P12110 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
COL6A2P12110 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.57□□□□□ -1.52
COL6A2P12110 AC068993.1-201ENST00000546724 589 ntBASIC5.57□□□□□ -1.52
COL6A2P12110 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.57□□□□□ -1.52
COL6A2P12110 RPS3AP4-201ENST00000555161 764 ntBASIC5.57□□□□□ -1.52
COL6A2P12110 AC092325.1-201ENST00000566449 554 ntBASIC5.57□□□□□ -1.52
COL6A2P12110 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.57□□□□□ -1.52
COL6A2P12110 AC091135.1-201ENST00000585943 307 ntBASIC5.57□□□□□ -1.52
COL6A2P12110 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.57□□□□□ -1.52
COL6A2P12110 SEPT7P9-203ENST00000604116 343 ntBASIC5.57□□□□□ -1.52
COL6A2P12110 TAS2R6P-201ENST00000605022 826 ntBASIC5.57□□□□□ -1.52
COL6A2P12110 MIR6071-201ENST00000616741 78 ntBASIC5.57□□□□□ -1.52
COL6A2P12110 uc_338.7-201ENST00000621834 124 ntBASIC5.57□□□□□ -1.52
COL6A2P12110 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL6A2P12110 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.57□□□□□ -1.52
COL6A2P12110 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.57□□□□□ -1.52
COL6A2P12110 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
COL6A2P12110 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL6A2P12110 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.57□□□□□ -1.52
COL6A2P12110 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.56□□□□□ -1.52
COL6A2P12110 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
COL6A2P12110 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
COL6A2P12110 ZNF37BP-203ENST00000452306 1352 ntBASIC5.56□□□□□ -1.52
COL6A2P12110 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
COL6A2P12110 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms