Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AC073587.1-201ENST00000447093 876 ntBASIC4.29□□□□□ -1.72
COL11A1P12107 AC115115.1-201ENST00000449927 248 ntBASIC4.29□□□□□ -1.72
COL11A1P12107 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.29□□□□□ -1.72
COL11A1P12107 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.29□□□□□ -1.72
COL11A1P12107 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
COL11A1P12107 HMGN1P11-201ENST00000508668 303 ntBASIC4.29□□□□□ -1.72
COL11A1P12107 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.29□□□□□ -1.72
COL11A1P12107 AC008638.3-201ENST00000603341 463 ntBASIC4.29□□□□□ -1.72
COL11A1P12107 AL392088.2-201ENST00000637607 285 ntBASIC4.29□□□□□ -1.72
COL11A1P12107 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.29□□□□□ -1.72
COL11A1P12107 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
COL11A1P12107 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
COL11A1P12107 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.28□□□□□ -1.72
COL11A1P12107 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
COL11A1P12107 BOLA3P4-201ENST00000418151 400 ntBASIC4.28□□□□□ -1.72
COL11A1P12107 GNG5P5-201ENST00000420444 220 ntBASIC4.28□□□□□ -1.72
COL11A1P12107 REREP1Y-201ENST00000422655 198 ntBASIC4.28□□□□□ -1.72
COL11A1P12107 REREP2Y-201ENST00000439103 200 ntBASIC4.28□□□□□ -1.72
COL11A1P12107 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC4.28□□□□□ -1.72
COL11A1P12107 AC007967.1-201ENST00000455422 1159 ntBASIC4.28□□□□□ -1.72
COL11A1P12107 AP000563.1-201ENST00000490865 758 ntBASIC4.28□□□□□ -1.72
COL11A1P12107 AC119751.5-201ENST00000514077 770 ntBASIC4.28□□□□□ -1.72
COL11A1P12107 OR5B10P-201ENST00000532869 642 ntBASIC4.28□□□□□ -1.72
COL11A1P12107 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.28□□□□□ -1.72
COL11A1P12107 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.28□□□□□ -1.72
COL11A1P12107 MIR7975-201ENST00000619350 68 ntBASIC4.28□□□□□ -1.72
COL11A1P12107 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.28□□□□□ -1.72
COL11A1P12107 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
COL11A1P12107 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
COL11A1P12107 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.28□□□□□ -1.72
COL11A1P12107 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
COL11A1P12107 PRO1804-201ENST00000623780 2050 ntBASIC4.28□□□□□ -1.72
COL11A1P12107 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.28□□□□□ -1.72
COL11A1P12107 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.28□□□□□ -1.72
COL11A1P12107 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
COL11A1P12107 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.28□□□□□ -1.72
COL11A1P12107 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
COL11A1P12107 ZNF602P-201ENST00000405929 924 ntBASIC4.28□□□□□ -1.72
COL11A1P12107 OR51A6P-201ENST00000418680 1004 ntBASIC4.28□□□□□ -1.72
COL11A1P12107 AC245054.1-201ENST00000420944 258 ntBASIC4.28□□□□□ -1.72
COL11A1P12107 KCTD9P3-201ENST00000434597 1169 ntBASIC4.28□□□□□ -1.72
COL11A1P12107 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.28□□□□□ -1.72
COL11A1P12107 CDY11P-201ENST00000447168 1651 ntBASIC4.28□□□□□ -1.72
COL11A1P12107 RPL21P10-201ENST00000463521 490 ntBASIC4.28□□□□□ -1.72
COL11A1P12107 RN7SL585P-201ENST00000470538 280 ntBASIC4.28□□□□□ -1.72
COL11A1P12107 SETP6-201ENST00000479329 568 ntBASIC4.28□□□□□ -1.72
COL11A1P12107 AL358832.1-201ENST00000497800 389 ntBASIC4.28□□□□□ -1.72
COL11A1P12107 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.28□□□□□ -1.72
COL11A1P12107 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.28□□□□□ -1.72
COL11A1P12107 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.28□□□□□ -1.72
COL11A1P12107 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
COL11A1P12107 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.28□□□□□ -1.72
COL11A1P12107 AC069240.1-201ENST00000548774 375 ntBASIC4.28□□□□□ -1.72
COL11A1P12107 RPL21P12-201ENST00000559810 515 ntBASIC4.28□□□□□ -1.72
COL11A1P12107 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.28□□□□□ -1.72
COL11A1P12107 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.28□□□□□ -1.72
COL11A1P12107 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.28□□□□□ -1.72
COL11A1P12107 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.28□□□□□ -1.72
COL11A1P12107 LSM1P2-201ENST00000604911 322 ntBASIC4.28□□□□□ -1.72
COL11A1P12107 BNIP3P19-201ENST00000605397 577 ntBASIC4.28□□□□□ -1.72
COL11A1P12107 AL139089.1-201ENST00000620372 975 ntBASIC4.28□□□□□ -1.72
COL11A1P12107 AC244258.1-201ENST00000637553 1071 ntBASIC4.28□□□□□ -1.72
COL11A1P12107 OR51C1P-202ENST00000641159 1444 ntBASIC4.28□□□□□ -1.72
COL11A1P12107 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.27□□□□□ -1.73
COL11A1P12107 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.27□□□□□ -1.73
COL11A1P12107 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
COL11A1P12107 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.27□□□□□ -1.73
COL11A1P12107 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
COL11A1P12107 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
COL11A1P12107 RNA5SP52-201ENST00000362448 134 ntBASIC4.27□□□□□ -1.73
COL11A1P12107 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.27□□□□□ -1.73
COL11A1P12107 CYCSP4-201ENST00000429682 331 ntBASIC4.27□□□□□ -1.73
COL11A1P12107 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.27□□□□□ -1.73
COL11A1P12107 AC069285.2-201ENST00000440210 275 ntBASIC4.27□□□□□ -1.73
COL11A1P12107 AC108941.1-201ENST00000502853 530 ntBASIC4.27□□□□□ -1.73
COL11A1P12107 CYP4A43P-201ENST00000568156 121 ntBASIC4.27□□□□□ -1.73
COL11A1P12107 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.27□□□□□ -1.73
COL11A1P12107 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
COL11A1P12107 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
COL11A1P12107 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.26□□□□□ -1.73
COL11A1P12107 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
COL11A1P12107 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.26□□□□□ -1.73
COL11A1P12107 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL11A1P12107 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
COL11A1P12107 MIR218-2-201ENST00000385006 110 ntBASIC4.26□□□□□ -1.73
COL11A1P12107 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.26□□□□□ -1.73
COL11A1P12107 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.26□□□□□ -1.73
COL11A1P12107 VN1R25P-201ENST00000443385 738 ntBASIC4.26□□□□□ -1.73
COL11A1P12107 VN1R40P-201ENST00000455196 941 ntBASIC4.26□□□□□ -1.73
COL11A1P12107 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
COL11A1P12107 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.26□□□□□ -1.73
COL11A1P12107 AC023161.2-201ENST00000551218 780 ntBASIC4.26□□□□□ -1.73
COL11A1P12107 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.26□□□□□ -1.73
COL11A1P12107 AC012603.1-201ENST00000606424 528 ntBASIC4.26□□□□□ -1.73
COL11A1P12107 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.26□□□□□ -1.73
COL11A1P12107 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.26□□□□□ -1.73
COL11A1P12107 SMG1P4-204ENST00000523028 4131 ntBASIC4.26□□□□□ -1.73
COL11A1P12107 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL11A1P12107 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.26□□□□□ -1.73
COL11A1P12107 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms