Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CTSDP07339 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.28□□□□□ -1.88
CTSDP07339 MTND2P17-201ENST00000550281 688 ntBASIC3.28□□□□□ -1.88
CTSDP07339 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.28□□□□□ -1.88
CTSDP07339 AC090877.1-201ENST00000561418 344 ntBASIC3.28□□□□□ -1.88
CTSDP07339 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC3.28□□□□□ -1.88
CTSDP07339 MIR4277-201ENST00000578298 84 ntBASIC3.28□□□□□ -1.88
CTSDP07339 MIR5096-201ENST00000583713 70 ntBASIC3.28□□□□□ -1.88
CTSDP07339 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.28□□□□□ -1.88
CTSDP07339 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.28□□□□□ -1.88
CTSDP07339 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.28□□□□□ -1.88
CTSDP07339 AL161729.3-201ENST00000603533 673 ntBASIC3.28□□□□□ -1.88
CTSDP07339 AL356218.2-201ENST00000605264 187 ntBASIC3.28□□□□□ -1.88
CTSDP07339 AL391261.4-201ENST00000616012 481 ntBASIC3.28□□□□□ -1.88
CTSDP07339 MIR7151-201ENST00000617477 60 ntBASIC3.28□□□□□ -1.88
CTSDP07339 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.28□□□□□ -1.88
CTSDP07339 AL139254.3-201ENST00000641097 674 ntBASIC3.28□□□□□ -1.88
CTSDP07339 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.28□□□□□ -1.88
CTSDP07339 AC006504.1-201ENST00000562493 3666 ntBASIC3.28□□□□□ -1.88
CTSDP07339 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CTSDP07339 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
CTSDP07339 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.28□□□□□ -1.88
CTSDP07339 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
CTSDP07339 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CTSDP07339 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CTSDP07339 PHKBP1-201ENST00000450951 1951 ntBASIC3.27□□□□□ -1.89
CTSDP07339 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CTSDP07339 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CTSDP07339 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.27□□□□□ -1.89
CTSDP07339 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CTSDP07339 RNU1-87P-201ENST00000363727 170 ntBASIC3.27□□□□□ -1.89
CTSDP07339 U3.22-201ENST00000391120 215 ntBASIC3.27□□□□□ -1.89
CTSDP07339 AL035696.2-201ENST00000407941 709 ntBASIC3.27□□□□□ -1.89
CTSDP07339 ELOCP19-201ENST00000411919 318 ntBASIC3.27□□□□□ -1.89
CTSDP07339 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.27□□□□□ -1.89
CTSDP07339 MTND4LP21-201ENST00000415303 295 ntBASIC3.27□□□□□ -1.89
CTSDP07339 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CTSDP07339 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CTSDP07339 AC010740.1-201ENST00000417035 684 ntBASIC3.27□□□□□ -1.89
CTSDP07339 RPA2P2-201ENST00000419698 796 ntBASIC3.27□□□□□ -1.89
CTSDP07339 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.27□□□□□ -1.89
CTSDP07339 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.27□□□□□ -1.89
CTSDP07339 FTH1P6-201ENST00000430768 320 ntBASIC3.27□□□□□ -1.89
CTSDP07339 RPS29P17-201ENST00000430795 166 ntBASIC3.27□□□□□ -1.89
CTSDP07339 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.27□□□□□ -1.89
CTSDP07339 FHP1-201ENST00000442741 703 ntBASIC3.27□□□□□ -1.89
CTSDP07339 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC3.27□□□□□ -1.89
CTSDP07339 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CTSDP07339 CYCSP42-201ENST00000450823 238 ntBASIC3.27□□□□□ -1.89
CTSDP07339 FCF1P7-201ENST00000451185 558 ntBASIC3.27□□□□□ -1.89
CTSDP07339 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.27□□□□□ -1.89
CTSDP07339 AC009963.2-201ENST00000453431 138 ntBASIC3.27□□□□□ -1.89
CTSDP07339 ANP32BP2-201ENST00000454525 545 ntBASIC3.27□□□□□ -1.89
CTSDP07339 SNRPGP5-201ENST00000456003 220 ntBASIC3.27□□□□□ -1.89
CTSDP07339 RNU7-170P-201ENST00000459303 61 ntBASIC3.27□□□□□ -1.89
CTSDP07339 METTL15P1-201ENST00000481421 1045 ntBASIC3.27□□□□□ -1.89
CTSDP07339 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.27□□□□□ -1.89
CTSDP07339 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.27□□□□□ -1.89
CTSDP07339 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.27□□□□□ -1.89
CTSDP07339 FTH1P9-201ENST00000513251 355 ntBASIC3.27□□□□□ -1.89
CTSDP07339 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.27□□□□□ -1.89
CTSDP07339 RN7SKP83-201ENST00000516512 178 ntBASIC3.27□□□□□ -1.89
CTSDP07339 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.27□□□□□ -1.89
CTSDP07339 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC3.27□□□□□ -1.89
CTSDP07339 OR4C2P-201ENST00000530855 1064 ntBASIC3.27□□□□□ -1.89
CTSDP07339 AC009643.1-201ENST00000532030 391 ntBASIC3.27□□□□□ -1.89
CTSDP07339 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
CTSDP07339 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.27□□□□□ -1.89
CTSDP07339 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.27□□□□□ -1.89
CTSDP07339 AC068831.4-201ENST00000556118 109 ntBASIC3.27□□□□□ -1.89
CTSDP07339 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC3.27□□□□□ -1.89
CTSDP07339 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.27□□□□□ -1.89
CTSDP07339 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.27□□□□□ -1.89
CTSDP07339 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.27□□□□□ -1.89
CTSDP07339 AL136295.6-201ENST00000610486 658 ntBASIC3.27□□□□□ -1.89
CTSDP07339 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.27□□□□□ -1.89
CTSDP07339 AL139089.1-201ENST00000620372 975 ntBASIC3.27□□□□□ -1.89
CTSDP07339 AC010435.1-201ENST00000623353 1177 ntBASIC3.27□□□□□ -1.89
CTSDP07339 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.27□□□□□ -1.89
CTSDP07339 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.27□□□□□ -1.89
CTSDP07339 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CTSDP07339 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CTSDP07339 CUL4AP1-201ENST00000514750 1863 ntBASIC3.26□□□□□ -1.89
CTSDP07339 AL445437.1-201ENST00000623157 3087 ntBASIC3.26□□□□□ -1.89
CTSDP07339 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CTSDP07339 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CTSDP07339 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CTSDP07339 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.26□□□□□ -1.89
CTSDP07339 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CTSDP07339 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CTSDP07339 RNU1-32P-201ENST00000363937 159 ntBASIC3.26□□□□□ -1.89
CTSDP07339 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.26□□□□□ -1.89
CTSDP07339 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CTSDP07339 RNU6-1263P-201ENST00000384601 106 ntBASIC3.26□□□□□ -1.89
CTSDP07339 AC011933.1-201ENST00000413334 321 ntBASIC3.26□□□□□ -1.89
CTSDP07339 RPL30P2-201ENST00000414021 291 ntBASIC3.26□□□□□ -1.89
CTSDP07339 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.26□□□□□ -1.89
CTSDP07339 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.26□□□□□ -1.89
CTSDP07339 RPL12P34-201ENST00000424532 479 ntBASIC3.26□□□□□ -1.89
CTSDP07339 AL732292.1-201ENST00000426692 226 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms