Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
TNFP01375 KPNA2P2-201ENST00000419546 1489 ntBASIC3.79□□□□□ -1.8
TNFP01375 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
TNFP01375 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
TNFP01375 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TNFP01375 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TNFP01375 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.78□□□□□ -1.8
TNFP01375 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
TNFP01375 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.78□□□□□ -1.8
TNFP01375 RNA5SP124-201ENST00000362739 110 ntBASIC3.78□□□□□ -1.8
TNFP01375 RNA5SP171-201ENST00000391071 115 ntBASIC3.78□□□□□ -1.8
TNFP01375 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.78□□□□□ -1.8
TNFP01375 AC096644.3-201ENST00000416788 338 ntBASIC3.78□□□□□ -1.8
TNFP01375 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.78□□□□□ -1.8
TNFP01375 NPM1P34-201ENST00000428821 893 ntBASIC3.78□□□□□ -1.8
TNFP01375 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.78□□□□□ -1.8
TNFP01375 AC104306.1-201ENST00000449702 371 ntBASIC3.78□□□□□ -1.8
TNFP01375 NANOGP10-201ENST00000453325 895 ntBASIC3.78□□□□□ -1.8
TNFP01375 AC025554.1-201ENST00000505641 188 ntBASIC3.78□□□□□ -1.8
TNFP01375 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.78□□□□□ -1.8
TNFP01375 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.78□□□□□ -1.8
TNFP01375 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TNFP01375 AC007066.2-202ENST00000566531 914 ntBASIC3.78□□□□□ -1.8
TNFP01375 AC090312.1-201ENST00000580637 348 ntBASIC3.78□□□□□ -1.8
TNFP01375 MIR4444-1-201ENST00000581696 74 ntBASIC3.78□□□□□ -1.8
TNFP01375 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.78□□□□□ -1.8
TNFP01375 MIR4444-2-201ENST00000584390 74 ntBASIC3.78□□□□□ -1.8
TNFP01375 AC008739.3-201ENST00000603262 127 ntBASIC3.78□□□□□ -1.8
TNFP01375 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.78□□□□□ -1.8
TNFP01375 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.78□□□□□ -1.8
TNFP01375 MIR6075-201ENST00000620782 95 ntBASIC3.78□□□□□ -1.8
TNFP01375 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
TNFP01375 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TNFP01375 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.78□□□□□ -1.8
TNFP01375 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.77□□□□□ -1.81
TNFP01375 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
TNFP01375 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.77□□□□□ -1.81
TNFP01375 AL929601.4-201ENST00000613011 1341 ntBASIC3.77□□□□□ -1.81
TNFP01375 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
TNFP01375 MIR199A2-201ENST00000385289 110 ntBASIC3.77□□□□□ -1.81
TNFP01375 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
TNFP01375 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC3.77□□□□□ -1.81
TNFP01375 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.77□□□□□ -1.81
TNFP01375 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.77□□□□□ -1.81
TNFP01375 AL050321.1-201ENST00000432363 400 ntBASIC3.77□□□□□ -1.81
TNFP01375 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.77□□□□□ -1.81
TNFP01375 KCTD9P3-201ENST00000434597 1169 ntBASIC3.77□□□□□ -1.81
TNFP01375 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.77□□□□□ -1.81
TNFP01375 AC010469.1-201ENST00000463864 576 ntBASIC3.77□□□□□ -1.81
TNFP01375 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.77□□□□□ -1.81
TNFP01375 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.77□□□□□ -1.81
TNFP01375 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.77□□□□□ -1.81
TNFP01375 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.77□□□□□ -1.81
TNFP01375 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.77□□□□□ -1.81
TNFP01375 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.77□□□□□ -1.81
TNFP01375 AL354760.1-201ENST00000608357 643 ntBASIC3.77□□□□□ -1.81
TNFP01375 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.77□□□□□ -1.81
TNFP01375 AC100871.1-201ENST00000507871 1456 ntBASIC3.77□□□□□ -1.81
TNFP01375 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
TNFP01375 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TNFP01375 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.76□□□□□ -1.81
TNFP01375 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TNFP01375 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
TNFP01375 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC3.76□□□□□ -1.81
TNFP01375 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
TNFP01375 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TNFP01375 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TNFP01375 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TNFP01375 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.76□□□□□ -1.81
TNFP01375 U8.11-201ENST00000384699 133 ntBASIC3.76□□□□□ -1.81
TNFP01375 U8.12-201ENST00000384701 133 ntBASIC3.76□□□□□ -1.81
TNFP01375 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.76□□□□□ -1.81
TNFP01375 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.76□□□□□ -1.81
TNFP01375 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC3.76□□□□□ -1.81
TNFP01375 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC3.76□□□□□ -1.81
TNFP01375 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
TNFP01375 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
TNFP01375 OR4F13P-201ENST00000428478 931 ntBASIC3.76□□□□□ -1.81
TNFP01375 Z74696.2-201ENST00000436514 498 ntBASIC3.76□□□□□ -1.81
TNFP01375 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.76□□□□□ -1.81
TNFP01375 SETD6P1-201ENST00000444575 317 ntBASIC3.76□□□□□ -1.81
TNFP01375 U8.18-201ENST00000459285 133 ntBASIC3.76□□□□□ -1.81
TNFP01375 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.76□□□□□ -1.81
TNFP01375 AL133162.1-201ENST00000463228 453 ntBASIC3.76□□□□□ -1.81
TNFP01375 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.76□□□□□ -1.81
TNFP01375 HMGB3P13-201ENST00000511263 607 ntBASIC3.76□□□□□ -1.81
TNFP01375 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC3.76□□□□□ -1.81
TNFP01375 RNU1-95P-201ENST00000516357 160 ntBASIC3.76□□□□□ -1.81
TNFP01375 RNU1-128P-201ENST00000516704 160 ntBASIC3.76□□□□□ -1.81
TNFP01375 SCARNA14-201ENST00000516903 136 ntBASIC3.76□□□□□ -1.81
TNFP01375 RNA5SP143-201ENST00000516936 115 ntBASIC3.76□□□□□ -1.81
TNFP01375 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.76□□□□□ -1.81
TNFP01375 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.76□□□□□ -1.81
TNFP01375 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC3.76□□□□□ -1.81
TNFP01375 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.76□□□□□ -1.81
TNFP01375 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.76□□□□□ -1.81
TNFP01375 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.76□□□□□ -1.81
TNFP01375 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC3.76□□□□□ -1.81
TNFP01375 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC3.76□□□□□ -1.81
TNFP01375 SNORA51-201ENST00000606420 132 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms