Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
UBE4BO95155 AC133552.5-201ENST00000604266 540 ntBASIC4.6□□□□□ -1.67
UBE4BO95155 AL096803.3-201ENST00000609032 532 ntBASIC4.6□□□□□ -1.67
UBE4BO95155 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.6□□□□□ -1.67
UBE4BO95155 AC110792.4-201ENST00000609843 298 ntBASIC4.6□□□□□ -1.67
UBE4BO95155 MIR3653-201ENST00000625572 110 ntBASIC4.6□□□□□ -1.67
UBE4BO95155 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.6□□□□□ -1.67
UBE4BO95155 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.6□□□□□ -1.67
UBE4BO95155 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
UBE4BO95155 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
UBE4BO95155 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
UBE4BO95155 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.6□□□□□ -1.67
UBE4BO95155 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.59□□□□□ -1.67
UBE4BO95155 AC114546.3-201ENST00000623582 1734 ntBASIC4.59□□□□□ -1.67
UBE4BO95155 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
UBE4BO95155 AC100871.1-201ENST00000507871 1456 ntBASIC4.59□□□□□ -1.67
UBE4BO95155 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
UBE4BO95155 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
UBE4BO95155 OR5T3-201ENST00000303059 1023 ntBASIC4.59□□□□□ -1.67
UBE4BO95155 RNA5SP52-201ENST00000362448 134 ntBASIC4.59□□□□□ -1.67
UBE4BO95155 MIR23B-201ENST00000384832 97 ntBASIC4.59□□□□□ -1.67
UBE4BO95155 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
UBE4BO95155 Z86062.1-201ENST00000406773 777 ntBASIC4.59□□□□□ -1.67
UBE4BO95155 EIF4A1P3-201ENST00000411521 244 ntBASIC4.59□□□□□ -1.67
UBE4BO95155 CHIAP3-201ENST00000423668 1133 ntBASIC4.59□□□□□ -1.67
UBE4BO95155 RSL24D1P6-201ENST00000426934 401 ntBASIC4.59□□□□□ -1.67
UBE4BO95155 MTND4LP14-201ENST00000429447 288 ntBASIC4.59□□□□□ -1.67
UBE4BO95155 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.59□□□□□ -1.67
UBE4BO95155 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
UBE4BO95155 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC4.59□□□□□ -1.67
UBE4BO95155 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.59□□□□□ -1.67
UBE4BO95155 AC109327.1-201ENST00000471666 403 ntBASIC4.59□□□□□ -1.67
UBE4BO95155 AC025445.1-201ENST00000502728 300 ntBASIC4.59□□□□□ -1.67
UBE4BO95155 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
UBE4BO95155 AC113430.1-201ENST00000506872 718 ntBASIC4.59□□□□□ -1.67
UBE4BO95155 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC4.59□□□□□ -1.67
UBE4BO95155 AC093824.1-201ENST00000508796 343 ntBASIC4.59□□□□□ -1.67
UBE4BO95155 AC026402.1-201ENST00000513642 170 ntBASIC4.59□□□□□ -1.67
UBE4BO95155 UBTFL9-201ENST00000534504 1148 ntBASIC4.59□□□□□ -1.67
UBE4BO95155 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.59□□□□□ -1.67
UBE4BO95155 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.59□□□□□ -1.67
UBE4BO95155 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.59□□□□□ -1.67
UBE4BO95155 TVP23BP1-201ENST00000557500 617 ntBASIC4.59□□□□□ -1.67
UBE4BO95155 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.59□□□□□ -1.67
UBE4BO95155 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.59□□□□□ -1.67
UBE4BO95155 AC022655.2-201ENST00000577280 318 ntBASIC4.59□□□□□ -1.67
UBE4BO95155 MIR548Y-201ENST00000582739 110 ntBASIC4.59□□□□□ -1.67
UBE4BO95155 AC114781.5-201ENST00000615297 108 ntBASIC4.59□□□□□ -1.67
UBE4BO95155 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
UBE4BO95155 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
UBE4BO95155 ERCC6-202ENST00000374127 1782 ntBASIC4.59□□□□□ -1.67
UBE4BO95155 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
UBE4BO95155 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
UBE4BO95155 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.59□□□□□ -1.68
UBE4BO95155 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
UBE4BO95155 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.59□□□□□ -1.68
UBE4BO95155 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
UBE4BO95155 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.59□□□□□ -1.68
UBE4BO95155 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
UBE4BO95155 CCT8P1-201ENST00000413611 1657 ntBASIC4.59□□□□□ -1.68
UBE4BO95155 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
UBE4BO95155 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.58□□□□□ -1.68
UBE4BO95155 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.58□□□□□ -1.68
UBE4BO95155 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.58□□□□□ -1.68
UBE4BO95155 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
UBE4BO95155 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
UBE4BO95155 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
UBE4BO95155 RNA5SP388-201ENST00000362584 119 ntBASIC4.58□□□□□ -1.68
UBE4BO95155 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
UBE4BO95155 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.58□□□□□ -1.68
UBE4BO95155 RNU6-185P-201ENST00000384421 107 ntBASIC4.58□□□□□ -1.68
UBE4BO95155 AP000357.1-201ENST00000409926 1165 ntBASIC4.58□□□□□ -1.68
UBE4BO95155 AC073136.2-201ENST00000417282 849 ntBASIC4.58□□□□□ -1.68
UBE4BO95155 CYP4F29P-201ENST00000420685 446 ntBASIC4.58□□□□□ -1.68
UBE4BO95155 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.58□□□□□ -1.68
UBE4BO95155 COX6B1P7-201ENST00000430845 235 ntBASIC4.58□□□□□ -1.68
UBE4BO95155 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.58□□□□□ -1.68
UBE4BO95155 AC025181.1-201ENST00000477507 416 ntBASIC4.58□□□□□ -1.68
UBE4BO95155 AC091167.1-201ENST00000492017 396 ntBASIC4.58□□□□□ -1.68
UBE4BO95155 RN7SL604P-201ENST00000492589 296 ntBASIC4.58□□□□□ -1.68
UBE4BO95155 RPS27AP13-201ENST00000498403 237 ntBASIC4.58□□□□□ -1.68
UBE4BO95155 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.58□□□□□ -1.68
UBE4BO95155 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
UBE4BO95155 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.58□□□□□ -1.68
UBE4BO95155 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.58□□□□□ -1.68
UBE4BO95155 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.58□□□□□ -1.68
UBE4BO95155 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.58□□□□□ -1.68
UBE4BO95155 AC023575.1-201ENST00000580510 358 ntBASIC4.58□□□□□ -1.68
UBE4BO95155 AC090312.1-201ENST00000580637 348 ntBASIC4.58□□□□□ -1.68
UBE4BO95155 AC005242.1-201ENST00000585658 438 ntBASIC4.58□□□□□ -1.68
UBE4BO95155 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.58□□□□□ -1.68
UBE4BO95155 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.58□□□□□ -1.68
UBE4BO95155 SUMO2P14-201ENST00000604488 293 ntBASIC4.58□□□□□ -1.68
UBE4BO95155 AC242628.1-201ENST00000606810 391 ntBASIC4.58□□□□□ -1.68
UBE4BO95155 AC090948.2-201ENST00000607363 564 ntBASIC4.58□□□□□ -1.68
UBE4BO95155 AC012467.1-201ENST00000607740 256 ntBASIC4.58□□□□□ -1.68
UBE4BO95155 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.58□□□□□ -1.68
UBE4BO95155 AC055764.2-201ENST00000610089 670 ntBASIC4.58□□□□□ -1.68
UBE4BO95155 MLECP1-201ENST00000615893 709 ntBASIC4.58□□□□□ -1.68
UBE4BO95155 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms