Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 SULT1C2P2-201ENST00000562517 294 ntBASIC4.37□□□□□ -1.71
ZIC3O60481 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.37□□□□□ -1.71
ZIC3O60481 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.37□□□□□ -1.71
ZIC3O60481 AC069545.1-201ENST00000605671 358 ntBASIC4.37□□□□□ -1.71
ZIC3O60481 FAM27B-201ENST00000610601 213 ntBASIC4.37□□□□□ -1.71
ZIC3O60481 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ZIC3O60481 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ZIC3O60481 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.37□□□□□ -1.71
ZIC3O60481 AC078883.4-201ENST00000623218 367 ntBASIC4.37□□□□□ -1.71
ZIC3O60481 CDRT1-208ENST00000630868 794 ntBASIC4.37□□□□□ -1.71
ZIC3O60481 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ZIC3O60481 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.37□□□□□ -1.71
ZIC3O60481 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ZIC3O60481 Z95331.1-201ENST00000623075 23112 ntBASIC4.37□□□□□ -1.71
ZIC3O60481 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ZIC3O60481 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ZIC3O60481 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ZIC3O60481 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ZIC3O60481 AL355852.1-201ENST00000454081 1771 ntBASIC4.37□□□□□ -1.71
ZIC3O60481 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.37□□□□□ -1.71
ZIC3O60481 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
ZIC3O60481 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.37□□□□□ -1.71
ZIC3O60481 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
ZIC3O60481 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ZIC3O60481 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.37□□□□□ -1.71
ZIC3O60481 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
ZIC3O60481 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
ZIC3O60481 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ZIC3O60481 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
ZIC3O60481 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
ZIC3O60481 AC100778.3-201ENST00000580060 1750 ntBASIC4.36□□□□□ -1.71
ZIC3O60481 AC017079.1-201ENST00000333650 415 ntBASIC4.36□□□□□ -1.71
ZIC3O60481 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
ZIC3O60481 Y_RNA.192-201ENST00000363977 102 ntBASIC4.36□□□□□ -1.71
ZIC3O60481 SNORD116-2-201ENST00000384274 95 ntBASIC4.36□□□□□ -1.71
ZIC3O60481 Y_RNA.465-201ENST00000384293 102 ntBASIC4.36□□□□□ -1.71
ZIC3O60481 SNORD116-6-201ENST00000384711 96 ntBASIC4.36□□□□□ -1.71
ZIC3O60481 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.36□□□□□ -1.71
ZIC3O60481 LINC00993-201ENST00000420453 540 ntBASIC4.36□□□□□ -1.71
ZIC3O60481 AC007435.1-201ENST00000421086 415 ntBASIC4.36□□□□□ -1.71
ZIC3O60481 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.36□□□□□ -1.71
ZIC3O60481 TXNL1P1-201ENST00000429528 554 ntBASIC4.36□□□□□ -1.71
ZIC3O60481 MTCO1P54-201ENST00000430139 712 ntBASIC4.36□□□□□ -1.71
ZIC3O60481 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.36□□□□□ -1.71
ZIC3O60481 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
ZIC3O60481 AL451139.1-201ENST00000434718 346 ntBASIC4.36□□□□□ -1.71
ZIC3O60481 RPL23AP76-201ENST00000441860 458 ntBASIC4.36□□□□□ -1.71
ZIC3O60481 HMGB1P48-201ENST00000446155 598 ntBASIC4.36□□□□□ -1.71
ZIC3O60481 BTF3P6-201ENST00000448054 499 ntBASIC4.36□□□□□ -1.71
ZIC3O60481 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.36□□□□□ -1.71
ZIC3O60481 NPM1P39-201ENST00000449818 867 ntBASIC4.36□□□□□ -1.71
ZIC3O60481 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
ZIC3O60481 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.36□□□□□ -1.71
ZIC3O60481 AC104971.1-201ENST00000495117 578 ntBASIC4.36□□□□□ -1.71
ZIC3O60481 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
ZIC3O60481 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
ZIC3O60481 DYNLL1P6-201ENST00000503440 264 ntBASIC4.36□□□□□ -1.71
ZIC3O60481 SCARNA22-201ENST00000503991 125 ntBASIC4.36□□□□□ -1.71
ZIC3O60481 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
ZIC3O60481 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.36□□□□□ -1.71
ZIC3O60481 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
ZIC3O60481 AL671862.1-201ENST00000515851 349 ntBASIC4.36□□□□□ -1.71
ZIC3O60481 RN7SKP276-201ENST00000516242 268 ntBASIC4.36□□□□□ -1.71
ZIC3O60481 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.36□□□□□ -1.71
ZIC3O60481 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.36□□□□□ -1.71
ZIC3O60481 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.36□□□□□ -1.71
ZIC3O60481 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.36□□□□□ -1.71
ZIC3O60481 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.36□□□□□ -1.71
ZIC3O60481 AC010198.2-201ENST00000550612 259 ntBASIC4.36□□□□□ -1.71
ZIC3O60481 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.36□□□□□ -1.71
ZIC3O60481 AC087465.1-201ENST00000560574 245 ntBASIC4.36□□□□□ -1.71
ZIC3O60481 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.36□□□□□ -1.71
ZIC3O60481 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.36□□□□□ -1.71
ZIC3O60481 AC093249.4-201ENST00000564755 259 ntBASIC4.36□□□□□ -1.71
ZIC3O60481 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.36□□□□□ -1.71
ZIC3O60481 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.36□□□□□ -1.71
ZIC3O60481 RN7SL802P-201ENST00000577858 299 ntBASIC4.36□□□□□ -1.71
ZIC3O60481 MIR5699-201ENST00000578903 90 ntBASIC4.36□□□□□ -1.71
ZIC3O60481 AC091042.1-201ENST00000579213 173 ntBASIC4.36□□□□□ -1.71
ZIC3O60481 VN1R84P-201ENST00000593697 235 ntBASIC4.36□□□□□ -1.71
ZIC3O60481 AL512782.1-201ENST00000603093 364 ntBASIC4.36□□□□□ -1.71
ZIC3O60481 AC006363.1-201ENST00000603806 463 ntBASIC4.36□□□□□ -1.71
ZIC3O60481 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.36□□□□□ -1.71
ZIC3O60481 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.36□□□□□ -1.71
ZIC3O60481 AC080013.3-201ENST00000606839 578 ntBASIC4.36□□□□□ -1.71
ZIC3O60481 AC023158.2-201ENST00000614876 543 ntBASIC4.36□□□□□ -1.71
ZIC3O60481 TLK1P1-201ENST00000456760 2440 ntBASIC4.36□□□□□ -1.71
ZIC3O60481 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.36□□□□□ -1.71
ZIC3O60481 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
ZIC3O60481 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.36□□□□□ -1.71
ZIC3O60481 SOCS5P3-201ENST00000425115 1576 ntBASIC4.36□□□□□ -1.71
ZIC3O60481 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ZIC3O60481 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.35□□□□□ -1.71
ZIC3O60481 HSPA8P14-201ENST00000552265 1805 ntBASIC4.35□□□□□ -1.71
ZIC3O60481 AC009313.2-201ENST00000417893 1941 ntBASIC4.35□□□□□ -1.71
ZIC3O60481 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ZIC3O60481 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
ZIC3O60481 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
ZIC3O60481 MIR585-201ENST00000384887 94 ntBASIC4.35□□□□□ -1.71
ZIC3O60481 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms