Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AP001646.1-201ENST00000527936 915 ntBASIC6.88□□□□□ -1.31
TMEM88BA6NKF7 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.88□□□□□ -1.31
TMEM88BA6NKF7 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC6.88□□□□□ -1.31
TMEM88BA6NKF7 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.88□□□□□ -1.31
TMEM88BA6NKF7 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.88□□□□□ -1.31
TMEM88BA6NKF7 BNIP3P33-201ENST00000598912 569 ntBASIC6.88□□□□□ -1.31
TMEM88BA6NKF7 AL359704.2-201ENST00000604335 521 ntBASIC6.88□□□□□ -1.31
TMEM88BA6NKF7 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.88□□□□□ -1.31
TMEM88BA6NKF7 AC002553.4-201ENST00000616896 331 ntBASIC6.88□□□□□ -1.31
TMEM88BA6NKF7 AP002505.2-201ENST00000623585 696 ntBASIC6.88□□□□□ -1.31
TMEM88BA6NKF7 AC132068.1-201ENST00000623805 459 ntBASIC6.88□□□□□ -1.31
TMEM88BA6NKF7 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC6.88□□□□□ -1.31
TMEM88BA6NKF7 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
TMEM88BA6NKF7 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC6.88□□□□□ -1.31
TMEM88BA6NKF7 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
TMEM88BA6NKF7 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC6.88□□□□□ -1.31
TMEM88BA6NKF7 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
TMEM88BA6NKF7 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
TMEM88BA6NKF7 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.88□□□□□ -1.31
TMEM88BA6NKF7 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 NLRP3P1-201ENST00000622303 1785 ntBASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 NFIB-202ENST00000380924 840 ntTSL 5 BASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 AL031679.1-201ENST00000400616 525 ntBASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 RAD23BP1-201ENST00000421404 1227 ntBASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 AC009961.2-201ENST00000435771 251 ntBASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 RPL7P11-201ENST00000437586 658 ntBASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 AC004980.3-201ENST00000447046 365 ntBASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 SEPT7P3-201ENST00000455017 621 ntBASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 AC034222.1-201ENST00000494052 532 ntBASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 AC090453.1-201ENST00000495560 436 ntBASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 AC104986.1-201ENST00000517978 436 ntBASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 COX6CP8-201ENST00000522620 226 ntBASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 AC022861.1-201ENST00000522981 663 ntBASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 HMGB1P33-201ENST00000563485 527 ntBASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 AL133457.1-201ENST00000564251 987 ntBASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 AC034268.2-201ENST00000571784 482 ntBASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 AC090312.1-201ENST00000580637 348 ntBASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 AC006116.3-201ENST00000592968 361 ntBASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 AC008277.2-201ENST00000605196 797 ntBASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 HSPE1P14-201ENST00000605812 302 ntBASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 AC018695.5-201ENST00000605872 315 ntBASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 AC092954.2-201ENST00000609103 430 ntBASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.87□□□□□ -1.31
TMEM88BA6NKF7 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC6.86□□□□□ -1.31
TMEM88BA6NKF7 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC6.86□□□□□ -1.31
TMEM88BA6NKF7 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TMEM88BA6NKF7 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TMEM88BA6NKF7 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
TMEM88BA6NKF7 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.86□□□□□ -1.31
TMEM88BA6NKF7 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
TMEM88BA6NKF7 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
TMEM88BA6NKF7 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC6.86□□□□□ -1.31
TMEM88BA6NKF7 AL442128.2-201ENST00000620246 1824 ntBASIC6.86□□□□□ -1.31
TMEM88BA6NKF7 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
TMEM88BA6NKF7 OR2M1P-201ENST00000318104 951 ntBASIC6.86□□□□□ -1.31
TMEM88BA6NKF7 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.86□□□□□ -1.31
TMEM88BA6NKF7 SNORA72.1-201ENST00000363485 129 ntBASIC6.86□□□□□ -1.31
TMEM88BA6NKF7 Y_RNA.303-201ENST00000364998 94 ntBASIC6.86□□□□□ -1.31
TMEM88BA6NKF7 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC6.86□□□□□ -1.31
TMEM88BA6NKF7 HSPD1P16-201ENST00000402302 394 ntBASIC6.86□□□□□ -1.31
TMEM88BA6NKF7 BX295541.1-201ENST00000417774 250 ntBASIC6.86□□□□□ -1.31
TMEM88BA6NKF7 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms