Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC048351.1-201ENST00000420064 602 ntBASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 AC004074.1-201ENST00000421810 1063 ntBASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 BX510359.3-201ENST00000422168 306 ntBASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 RPL21P110-201ENST00000433345 446 ntBASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 MYO5BP2-201ENST00000449815 1277 ntBASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 AC084024.2-201ENST00000503480 791 ntBASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 RNU1-6P-201ENST00000516290 144 ntBASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 HMGB1P23-201ENST00000518743 568 ntBASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 AC021006.3-201ENST00000530771 192 ntBASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 AC007834.2-201ENST00000536310 343 ntBASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 OSBPL9P5-201ENST00000542581 171 ntBASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 AC092747.2-201ENST00000545069 983 ntBASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 NBEAP1-201ENST00000554452 979 ntBASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 SETP1-201ENST00000556014 845 ntBASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 AADACP1-206ENST00000561502 1193 ntBASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 AL354943.1-201ENST00000572103 781 ntBASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 AC140113.4-201ENST00000622087 222 ntBASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 AC015726.3-201ENST00000624501 418 ntBASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 TTC39DP-201ENST00000416781 1688 ntBASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 AP005901.5-201ENST00000545779 1796 ntBASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 AP001273.1-201ENST00000624493 3152 ntBASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 INTS6P1-201ENST00000504674 2530 ntBASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 AC092079.1-201ENST00000558620 1985 ntBASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 CASC19-204ENST00000641001 2055 ntBASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 SNORD116-8-201ENST00000384365 95 ntBASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 MIR921-201ENST00000401133 56 ntBASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 RNU2-6P-201ENST00000411404 190 ntBASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 MGAT2P2-201ENST00000427194 797 ntBASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 AC073069.1-201ENST00000428657 441 ntBASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 FTLP19-201ENST00000433300 394 ntBASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 PPIAP13-201ENST00000434706 478 ntBASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 YWHAQP9-201ENST00000445891 512 ntBASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 RPS5P7-201ENST00000456664 608 ntBASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 AC005229.2-201ENST00000456995 399 ntBASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 RPL23AP71-201ENST00000470966 469 ntBASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 RN7SL817P-201ENST00000480777 288 ntBASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 RN7SL346P-201ENST00000491561 294 ntBASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 AC105313.1-201ENST00000509121 353 ntBASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 AC010285.3-201ENST00000511668 676 ntBASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 OR10G5P-201ENST00000532733 358 ntBASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 AC090751.1-201ENST00000566966 267 ntBASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 MRPS35P3-201ENST00000603189 709 ntBASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 AL450489.1-201ENST00000612071 468 ntBASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 AC107075.1-201ENST00000613695 314 ntBASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 AL353726.1-201ENST00000614041 1000 ntBASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 ATE1-AS1-202ENST00000636460 506 ntBASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
TCRBV7S3A2A0A539 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 AC008079.2-201ENST00000623543 20396 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms