Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.8□□□□□ -1.64
RAI2Q9Y5P3 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.8□□□□□ -1.64
RAI2Q9Y5P3 AC007224.1-201ENST00000564410 144 ntBASIC4.8□□□□□ -1.64
RAI2Q9Y5P3 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.8□□□□□ -1.64
RAI2Q9Y5P3 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.8□□□□□ -1.64
RAI2Q9Y5P3 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.8□□□□□ -1.64
RAI2Q9Y5P3 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.8□□□□□ -1.64
RAI2Q9Y5P3 AC025588.2-201ENST00000604851 466 ntBASIC4.8□□□□□ -1.64
RAI2Q9Y5P3 AC024060.1-201ENST00000607052 494 ntBASIC4.8□□□□□ -1.64
RAI2Q9Y5P3 AC096586.1-201ENST00000610267 561 ntBASIC4.8□□□□□ -1.64
RAI2Q9Y5P3 AC123767.1-202ENST00000620407 817 ntBASIC4.8□□□□□ -1.64
RAI2Q9Y5P3 AC015804.1-201ENST00000622935 435 ntBASIC4.8□□□□□ -1.64
RAI2Q9Y5P3 AC021106.3-201ENST00000623925 531 ntBASIC4.8□□□□□ -1.64
RAI2Q9Y5P3 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
RAI2Q9Y5P3 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
RAI2Q9Y5P3 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RAI2Q9Y5P3 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RAI2Q9Y5P3 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
RAI2Q9Y5P3 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RAI2Q9Y5P3 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RAI2Q9Y5P3 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.8□□□□□ -1.64
RAI2Q9Y5P3 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RAI2Q9Y5P3 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RAI2Q9Y5P3 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
RAI2Q9Y5P3 VN2R3P-201ENST00000422626 1412 ntBASIC4.8□□□□□ -1.64
RAI2Q9Y5P3 AL022393.1-201ENST00000625142 1677 ntBASIC4.8□□□□□ -1.64
RAI2Q9Y5P3 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 AC017007.4-201ENST00000503353 1352 ntBASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 KARSP3-201ENST00000571212 1504 ntBASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 MIR298-201ENST00000401212 88 ntBASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 RNU4-22P-201ENST00000411058 166 ntBASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 HMGB3P31-201ENST00000413333 595 ntBASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 BTF3P8-201ENST00000414577 526 ntBASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 BX510359.2-201ENST00000417920 305 ntBASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 OR2AH1P-201ENST00000425717 928 ntBASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 RPL23AP4-201ENST00000427757 463 ntBASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 RPS6P15-201ENST00000431996 751 ntBASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 AL359265.2-201ENST00000434367 631 ntBASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 AC005154.2-201ENST00000438110 379 ntBASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 AC092170.1-201ENST00000440211 356 ntBASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 EEF1A1P39-201ENST00000440791 250 ntBASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 MTND2P22-201ENST00000444325 1033 ntBASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 HMGB3P6-201ENST00000444896 598 ntBASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 RPL12P20-201ENST00000475538 479 ntBASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 AC004263.1-201ENST00000479327 332 ntBASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 AC020593.1-201ENST00000507399 299 ntBASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 AC118465.1-201ENST00000513820 1271 ntBASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 RNA5SP464-201ENST00000516251 108 ntBASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 FTH1P11-201ENST00000517577 551 ntBASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 AC006518.2-201ENST00000542513 940 ntBASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 AC093765.1-201ENST00000603758 881 ntBASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 AC011374.2-201ENST00000607135 526 ntBASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 AL121890.3-201ENST00000618494 516 ntBASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 AC022079.1-201ENST00000621546 602 ntBASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 AP003485.2-201ENST00000623636 610 ntBASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 OR8B1P-202ENST00000641132 1178 ntBASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 AC119674.1-212ENST00000641155 993 ntBASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RAI2Q9Y5P3 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms