Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
MRPS28Q9Y2Q9 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
MRPS28Q9Y2Q9 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 CYP1D1P-201ENST00000416662 1433 ntBASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 AC099786.3-201ENST00000565735 1410 ntBASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 OR52B1P-201ENST00000316506 909 ntBASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 RNU1-20P-201ENST00000363314 162 ntBASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 RNA5SP27-201ENST00000363839 119 ntBASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 RNU6-146P-201ENST00000384602 108 ntBASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 AL589647.1-201ENST00000402485 466 ntBASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 RPL7P27-201ENST00000403775 720 ntBASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 AC114755.2-201ENST00000413520 361 ntBASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 RPL21P108-201ENST00000413857 481 ntBASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 AC019050.1-201ENST00000418508 492 ntBASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 AC027644.1-201ENST00000419595 298 ntBASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 AL513175.2-201ENST00000422071 443 ntBASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 RPL12P34-201ENST00000424532 479 ntBASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 C1DP1-201ENST00000426049 402 ntBASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 SETP8-201ENST00000435341 628 ntBASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 RPL7P11-201ENST00000437586 658 ntBASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 PTGES3P5-201ENST00000455109 434 ntBASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 RPL5P23-201ENST00000496040 868 ntBASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 AC140172.1-201ENST00000502928 141 ntBASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 AC104417.1-201ENST00000523974 751 ntBASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 DUXAP6-201ENST00000553858 601 ntBASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 RN7SL802P-201ENST00000577858 299 ntBASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 MIR5699-201ENST00000578903 90 ntBASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 AC209154.1-201ENST00000582156 337 ntBASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 BNIP3P24-201ENST00000593398 557 ntBASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 NIFKP6-201ENST00000598115 845 ntBASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 AC013468.1-201ENST00000608680 598 ntBASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 AP001521.2-201ENST00000608772 546 ntBASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 AC007497.1-201ENST00000610421 561 ntBASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 EIF3FP1-201ENST00000613970 806 ntBASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 AC231759.1-201ENST00000616455 597 ntBASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 U6.48-201ENST00000618523 106 ntBASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 AC010975.3-201ENST00000618727 978 ntBASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.04□□□□□ -1.76
MRPS28Q9Y2Q9 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 CCT8P1-201ENST00000413611 1657 ntBASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 NF1-214ENST00000490416 1329 ntTSL 3 BASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 RPL23P2-201ENST00000320371 421 ntBASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 SNORA74A-201ENST00000364089 198 ntBASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 RNU6-532P-201ENST00000384318 107 ntBASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 RNA5SP372-201ENST00000390836 115 ntBASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 RNU1-82P-201ENST00000390851 165 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 148.4 ms