Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 HMGB3P30-201ENST00000457863 606 ntBASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 AC090142.1-201ENST00000465776 462 ntBASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 RN7SL705P-201ENST00000481678 294 ntBASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 AL390198.2-201ENST00000510553 222 ntBASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 RNU4-77P-201ENST00000516692 156 ntBASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 AC022559.1-201ENST00000520905 205 ntBASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 AC084783.1-201ENST00000565846 910 ntBASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 RPL7AP69-201ENST00000595306 806 ntBASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 NDUFB9P1-201ENST00000604683 510 ntBASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 AC009237.17-201ENST00000618111 748 ntBASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 AL606534.2-204ENST00000635008 178 ntBASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 COG2-209ENST00000534989 2963 ntTSL 2 BASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 AP003119.3-201ENST00000566747 4192 ntBASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
TRIM35Q9UPQ4 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC8.74□□□□□ -1.01
TRIM35Q9UPQ4 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
TRIM35Q9UPQ4 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC8.74□□□□□ -1.01
TRIM35Q9UPQ4 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC8.74□□□□□ -1.01
TRIM35Q9UPQ4 AL133243.4-201ENST00000623116 3109 ntBASIC8.74□□□□□ -1.01
TRIM35Q9UPQ4 BMPR1APS1-201ENST00000403332 1598 ntBASIC8.74□□□□□ -1.01
TRIM35Q9UPQ4 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
TRIM35Q9UPQ4 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
TRIM35Q9UPQ4 AL596244.1-201ENST00000567068 3779 ntBASIC8.74□□□□□ -1.01
TRIM35Q9UPQ4 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
TRIM35Q9UPQ4 UGT2B27P-201ENST00000505092 1620 ntBASIC8.74□□□□□ -1.01
TRIM35Q9UPQ4 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
TRIM35Q9UPQ4 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
TRIM35Q9UPQ4 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
TRIM35Q9UPQ4 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
TRIM35Q9UPQ4 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC8.74□□□□□ -1.01
TRIM35Q9UPQ4 RNU6-552P-201ENST00000362869 119 ntBASIC8.74□□□□□ -1.01
TRIM35Q9UPQ4 RNA5SP85-201ENST00000365378 119 ntBASIC8.74□□□□□ -1.01
TRIM35Q9UPQ4 RNU6-81P-201ENST00000365608 104 ntBASIC8.74□□□□□ -1.01
TRIM35Q9UPQ4 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
TRIM35Q9UPQ4 Y_RNA.416-201ENST00000384014 113 ntBASIC8.74□□□□□ -1.01
TRIM35Q9UPQ4 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
TRIM35Q9UPQ4 AC128677.1-201ENST00000436016 442 ntBASIC8.74□□□□□ -1.01
TRIM35Q9UPQ4 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC8.74□□□□□ -1.01
TRIM35Q9UPQ4 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
TRIM35Q9UPQ4 RPS23P3-201ENST00000470993 430 ntBASIC8.74□□□□□ -1.01
TRIM35Q9UPQ4 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC8.74□□□□□ -1.01
TRIM35Q9UPQ4 RNU6-714P-201ENST00000516963 103 ntBASIC8.74□□□□□ -1.01
TRIM35Q9UPQ4 Y_RNA.715-201ENST00000517082 110 ntBASIC8.74□□□□□ -1.01
TRIM35Q9UPQ4 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC8.74□□□□□ -1.01
TRIM35Q9UPQ4 AC025884.1-201ENST00000556034 378 ntBASIC8.74□□□□□ -1.01
TRIM35Q9UPQ4 AP003115.1-201ENST00000569849 463 ntBASIC8.74□□□□□ -1.01
TRIM35Q9UPQ4 AC036176.3-201ENST00000602456 418 ntBASIC8.74□□□□□ -1.01
TRIM35Q9UPQ4 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC8.74□□□□□ -1.01
TRIM35Q9UPQ4 AC004241.2-201ENST00000614562 444 ntBASIC8.74□□□□□ -1.01
TRIM35Q9UPQ4 AC010378.1-201ENST00000619270 362 ntBASIC8.74□□□□□ -1.01
TRIM35Q9UPQ4 AC135068.11-201ENST00000636378 921 ntBASIC8.74□□□□□ -1.01
TRIM35Q9UPQ4 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
TRIM35Q9UPQ4 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC8.74□□□□□ -1.01
TRIM35Q9UPQ4 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
TRIM35Q9UPQ4 OFD1P5Y-201ENST00000447585 2590 ntBASIC8.74□□□□□ -1.01
TRIM35Q9UPQ4 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
TRIM35Q9UPQ4 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
TRIM35Q9UPQ4 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC8.74□□□□□ -1.01
TRIM35Q9UPQ4 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC8.74□□□□□ -1.01
TRIM35Q9UPQ4 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC8.74□□□□□ -1.01
TRIM35Q9UPQ4 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC8.74□□□□□ -1.01
TRIM35Q9UPQ4 CTNNA1P1-201ENST00000515849 2728 ntBASIC8.74□□□□□ -1.01
TRIM35Q9UPQ4 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
TRIM35Q9UPQ4 AC092125.1-201ENST00000562568 1995 ntBASIC8.73□□□□□ -1.01
TRIM35Q9UPQ4 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
TRIM35Q9UPQ4 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
TRIM35Q9UPQ4 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
TRIM35Q9UPQ4 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
TRIM35Q9UPQ4 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
TRIM35Q9UPQ4 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
TRIM35Q9UPQ4 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
TRIM35Q9UPQ4 GTF2H2B-203ENST00000508065 1432 ntBASIC8.73□□□□□ -1.01
TRIM35Q9UPQ4 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
TRIM35Q9UPQ4 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
TRIM35Q9UPQ4 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
TRIM35Q9UPQ4 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
TRIM35Q9UPQ4 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC8.73□□□□□ -1.01
TRIM35Q9UPQ4 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC8.73□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms