Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
NPC1L1Q9UHC9 RN7SKP159-201ENST00000410657 292 ntBASIC5.34□□□□□ -1.55
NPC1L1Q9UHC9 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NPC1L1Q9UHC9 TRIM60P17-201ENST00000415181 719 ntBASIC5.34□□□□□ -1.55
NPC1L1Q9UHC9 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.34□□□□□ -1.55
NPC1L1Q9UHC9 RPL5P30-201ENST00000465511 891 ntBASIC5.34□□□□□ -1.55
NPC1L1Q9UHC9 AGGF1P3-201ENST00000493675 1213 ntBASIC5.34□□□□□ -1.55
NPC1L1Q9UHC9 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.34□□□□□ -1.55
NPC1L1Q9UHC9 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC5.34□□□□□ -1.55
NPC1L1Q9UHC9 AL133247.2-201ENST00000603236 482 ntBASIC5.34□□□□□ -1.55
NPC1L1Q9UHC9 AL390816.3-201ENST00000604527 1066 ntBASIC5.34□□□□□ -1.55
NPC1L1Q9UHC9 AC128687.2-201ENST00000609657 566 ntBASIC5.34□□□□□ -1.55
NPC1L1Q9UHC9 AC107905.1-201ENST00000616204 426 ntBASIC5.34□□□□□ -1.55
NPC1L1Q9UHC9 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NPC1L1Q9UHC9 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NPC1L1Q9UHC9 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.34□□□□□ -1.55
NPC1L1Q9UHC9 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NPC1L1Q9UHC9 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
NPC1L1Q9UHC9 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
NPC1L1Q9UHC9 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
NPC1L1Q9UHC9 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
NPC1L1Q9UHC9 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
NPC1L1Q9UHC9 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NPC1L1Q9UHC9 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
NPC1L1Q9UHC9 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NPC1L1Q9UHC9 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NPC1L1Q9UHC9 SNORA71.3-201ENST00000362582 128 ntBASIC5.33□□□□□ -1.56
NPC1L1Q9UHC9 SNORD74.4-201ENST00000364129 80 ntBASIC5.33□□□□□ -1.56
NPC1L1Q9UHC9 AL672167.2-201ENST00000377164 879 ntBASIC5.33□□□□□ -1.56
NPC1L1Q9UHC9 LAP3P1-201ENST00000403648 294 ntBASIC5.33□□□□□ -1.56
NPC1L1Q9UHC9 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC5.33□□□□□ -1.56
NPC1L1Q9UHC9 RPL7AP73-201ENST00000413490 353 ntBASIC5.33□□□□□ -1.56
NPC1L1Q9UHC9 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NPC1L1Q9UHC9 Z97055.1-201ENST00000419730 712 ntBASIC5.33□□□□□ -1.56
NPC1L1Q9UHC9 AC106901.1-201ENST00000425086 698 ntBASIC5.33□□□□□ -1.56
NPC1L1Q9UHC9 RPL7P2-201ENST00000427639 268 ntBASIC5.33□□□□□ -1.56
NPC1L1Q9UHC9 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NPC1L1Q9UHC9 ATP5HP2-201ENST00000433885 485 ntBASIC5.33□□□□□ -1.56
NPC1L1Q9UHC9 KCTD9P3-201ENST00000434597 1169 ntBASIC5.33□□□□□ -1.56
NPC1L1Q9UHC9 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.33□□□□□ -1.56
NPC1L1Q9UHC9 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.33□□□□□ -1.56
NPC1L1Q9UHC9 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NPC1L1Q9UHC9 OR6C72P-201ENST00000451403 892 ntBASIC5.33□□□□□ -1.56
NPC1L1Q9UHC9 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.33□□□□□ -1.56
NPC1L1Q9UHC9 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
NPC1L1Q9UHC9 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC5.33□□□□□ -1.56
NPC1L1Q9UHC9 RNU6-352P-201ENST00000516908 107 ntBASIC5.33□□□□□ -1.56
NPC1L1Q9UHC9 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC5.33□□□□□ -1.56
NPC1L1Q9UHC9 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC5.33□□□□□ -1.56
NPC1L1Q9UHC9 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.33□□□□□ -1.56
NPC1L1Q9UHC9 AL049874.4-201ENST00000557593 255 ntBASIC5.33□□□□□ -1.56
NPC1L1Q9UHC9 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.33□□□□□ -1.56
NPC1L1Q9UHC9 AF001550.2-201ENST00000636643 217 ntBASIC5.33□□□□□ -1.56
NPC1L1Q9UHC9 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
NPC1L1Q9UHC9 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
NPC1L1Q9UHC9 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NPC1L1Q9UHC9 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NPC1L1Q9UHC9 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.33□□□□□ -1.56
NPC1L1Q9UHC9 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NPC1L1Q9UHC9 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.33□□□□□ -1.56
NPC1L1Q9UHC9 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
NPC1L1Q9UHC9 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.33□□□□□ -1.56
NPC1L1Q9UHC9 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
NPC1L1Q9UHC9 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.32□□□□□ -1.56
NPC1L1Q9UHC9 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
NPC1L1Q9UHC9 RPL17P50-201ENST00000396131 546 ntBASIC5.32□□□□□ -1.56
NPC1L1Q9UHC9 AL450992.3-201ENST00000413192 568 ntBASIC5.32□□□□□ -1.56
NPC1L1Q9UHC9 VN1R31P-201ENST00000417498 730 ntBASIC5.32□□□□□ -1.56
NPC1L1Q9UHC9 OR51A6P-201ENST00000418680 1004 ntBASIC5.32□□□□□ -1.56
NPC1L1Q9UHC9 Z74696.2-201ENST00000436514 498 ntBASIC5.32□□□□□ -1.56
NPC1L1Q9UHC9 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5.32□□□□□ -1.56
NPC1L1Q9UHC9 RPS4XP15-201ENST00000489210 795 ntBASIC5.32□□□□□ -1.56
NPC1L1Q9UHC9 AC010460.1-201ENST00000507087 466 ntBASIC5.32□□□□□ -1.56
NPC1L1Q9UHC9 SCARNA14-201ENST00000516903 136 ntBASIC5.32□□□□□ -1.56
NPC1L1Q9UHC9 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.32□□□□□ -1.56
NPC1L1Q9UHC9 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
NPC1L1Q9UHC9 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.32□□□□□ -1.56
NPC1L1Q9UHC9 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC5.32□□□□□ -1.56
NPC1L1Q9UHC9 AC087499.8-201ENST00000578406 226 ntBASIC5.32□□□□□ -1.56
NPC1L1Q9UHC9 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.32□□□□□ -1.56
NPC1L1Q9UHC9 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
NPC1L1Q9UHC9 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
NPC1L1Q9UHC9 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
NPC1L1Q9UHC9 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC5.32□□□□□ -1.56
NPC1L1Q9UHC9 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NPC1L1Q9UHC9 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.31□□□□□ -1.56
NPC1L1Q9UHC9 RNU6-1331P-201ENST00000363658 106 ntBASIC5.31□□□□□ -1.56
NPC1L1Q9UHC9 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC5.31□□□□□ -1.56
NPC1L1Q9UHC9 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NPC1L1Q9UHC9 PTMAP2-201ENST00000397627 327 ntBASIC5.31□□□□□ -1.56
NPC1L1Q9UHC9 RNA5SP104-201ENST00000410989 118 ntBASIC5.31□□□□□ -1.56
NPC1L1Q9UHC9 RPS29P7-201ENST00000439662 171 ntBASIC5.31□□□□□ -1.56
NPC1L1Q9UHC9 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC5.31□□□□□ -1.56
NPC1L1Q9UHC9 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.31□□□□□ -1.56
NPC1L1Q9UHC9 AC146944.2-203ENST00000502493 354 ntBASIC5.31□□□□□ -1.56
NPC1L1Q9UHC9 NPM1P41-201ENST00000512920 831 ntBASIC5.31□□□□□ -1.56
NPC1L1Q9UHC9 AC139495.1-202ENST00000513164 354 ntBASIC5.31□□□□□ -1.56
NPC1L1Q9UHC9 RNU4ATAC6P-201ENST00000516592 126 ntBASIC5.31□□□□□ -1.56
NPC1L1Q9UHC9 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.31□□□□□ -1.56
NPC1L1Q9UHC9 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms