Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 AC021146.4-201ENST00000309229 279 ntBASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 RNA5SP509-201ENST00000364577 119 ntBASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 SNORA71.2-201ENST00000364941 134 ntBASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 MTCO3P4-201ENST00000419236 787 ntBASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 RPL7AP25-201ENST00000423357 805 ntBASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 AC004938.1-201ENST00000438468 308 ntBASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 AC008280.2-201ENST00000455473 307 ntBASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 GTF2IP12-201ENST00000456547 356 ntBASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 AC104763.1-201ENST00000475274 360 ntBASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 ARL4AP1-201ENST00000503220 705 ntBASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 LINC00901.1-201ENST00000617252 152 ntBASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 AL035461.2-201ENST00000619201 524 ntBASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 AL023881.1-201ENST00000621088 301 ntBASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HDAC6Q9UBN7 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HDAC6Q9UBN7 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
HDAC6Q9UBN7 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HDAC6Q9UBN7 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.17□□□□□ -1.58
HDAC6Q9UBN7 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HDAC6Q9UBN7 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.17□□□□□ -1.58
HDAC6Q9UBN7 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HDAC6Q9UBN7 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HDAC6Q9UBN7 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HDAC6Q9UBN7 AP000542.2-201ENST00000623199 6179 ntBASIC5.17□□□□□ -1.58
HDAC6Q9UBN7 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.17□□□□□ -1.58
HDAC6Q9UBN7 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HDAC6Q9UBN7 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.17□□□□□ -1.58
HDAC6Q9UBN7 MIR320B1-201ENST00000390209 79 ntBASIC5.17□□□□□ -1.58
HDAC6Q9UBN7 RPL23AP59-201ENST00000399415 461 ntBASIC5.17□□□□□ -1.58
HDAC6Q9UBN7 DNAJC19P6-201ENST00000401853 280 ntBASIC5.17□□□□□ -1.58
HDAC6Q9UBN7 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.17□□□□□ -1.58
HDAC6Q9UBN7 AC023128.2-201ENST00000420880 1223 ntBASIC5.17□□□□□ -1.58
HDAC6Q9UBN7 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.17□□□□□ -1.58
HDAC6Q9UBN7 MTCO1P52-201ENST00000433928 531 ntBASIC5.17□□□□□ -1.58
HDAC6Q9UBN7 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.17□□□□□ -1.58
HDAC6Q9UBN7 RPS26P2-201ENST00000440331 348 ntBASIC5.17□□□□□ -1.58
HDAC6Q9UBN7 AL353093.1-201ENST00000441292 436 ntBASIC5.17□□□□□ -1.58
HDAC6Q9UBN7 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.17□□□□□ -1.58
HDAC6Q9UBN7 AL358794.1-201ENST00000445689 381 ntBASIC5.17□□□□□ -1.58
HDAC6Q9UBN7 AL031313.1-201ENST00000448435 256 ntBASIC5.17□□□□□ -1.58
HDAC6Q9UBN7 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC5.17□□□□□ -1.58
HDAC6Q9UBN7 AC109327.1-201ENST00000471666 403 ntBASIC5.17□□□□□ -1.58
HDAC6Q9UBN7 DEFB109F-201ENST00000491870 277 ntBASIC5.17□□□□□ -1.58
HDAC6Q9UBN7 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.17□□□□□ -1.58
HDAC6Q9UBN7 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HDAC6Q9UBN7 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.17□□□□□ -1.58
HDAC6Q9UBN7 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC5.17□□□□□ -1.58
HDAC6Q9UBN7 RNU6-276P-201ENST00000516114 96 ntBASIC5.17□□□□□ -1.58
HDAC6Q9UBN7 RN7SKP21-201ENST00000516503 220 ntBASIC5.17□□□□□ -1.58
HDAC6Q9UBN7 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HDAC6Q9UBN7 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.17□□□□□ -1.58
HDAC6Q9UBN7 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.17□□□□□ -1.58
HDAC6Q9UBN7 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.17□□□□□ -1.58
HDAC6Q9UBN7 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HDAC6Q9UBN7 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.17□□□□□ -1.58
HDAC6Q9UBN7 AC008083.2-201ENST00000546707 476 ntBASIC5.17□□□□□ -1.58
HDAC6Q9UBN7 FKBP1BP1-201ENST00000553366 325 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms