Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LRTM1Q9HBL6 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
LRTM1Q9HBL6 AC011155.1-201ENST00000316512 456 ntBASIC3.85□□□□□ -1.79
LRTM1Q9HBL6 SNORA62.3-201ENST00000365110 153 ntBASIC3.85□□□□□ -1.79
LRTM1Q9HBL6 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LRTM1Q9HBL6 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
LRTM1Q9HBL6 HSPE1P12-201ENST00000412576 301 ntBASIC3.85□□□□□ -1.79
LRTM1Q9HBL6 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.85□□□□□ -1.79
LRTM1Q9HBL6 RPL36AP36-201ENST00000418616 301 ntBASIC3.85□□□□□ -1.79
LRTM1Q9HBL6 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.85□□□□□ -1.79
LRTM1Q9HBL6 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.85□□□□□ -1.79
LRTM1Q9HBL6 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.85□□□□□ -1.79
LRTM1Q9HBL6 RPL23AP38-201ENST00000423801 469 ntBASIC3.85□□□□□ -1.79
LRTM1Q9HBL6 ATP5HP2-201ENST00000433885 485 ntBASIC3.85□□□□□ -1.79
LRTM1Q9HBL6 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.85□□□□□ -1.79
LRTM1Q9HBL6 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.85□□□□□ -1.79
LRTM1Q9HBL6 NUTF2P3-201ENST00000448540 384 ntBASIC3.85□□□□□ -1.79
LRTM1Q9HBL6 FGF7P3-201ENST00000454645 303 ntBASIC3.85□□□□□ -1.79
LRTM1Q9HBL6 RPL23AP71-201ENST00000470966 469 ntBASIC3.85□□□□□ -1.79
LRTM1Q9HBL6 UQCRHP4-201ENST00000471686 272 ntBASIC3.85□□□□□ -1.79
LRTM1Q9HBL6 RPS6P4-201ENST00000494693 758 ntBASIC3.85□□□□□ -1.79
LRTM1Q9HBL6 AP002812.1-201ENST00000495378 474 ntBASIC3.85□□□□□ -1.79
LRTM1Q9HBL6 AC020593.1-201ENST00000507399 299 ntBASIC3.85□□□□□ -1.79
LRTM1Q9HBL6 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.85□□□□□ -1.79
LRTM1Q9HBL6 AC026726.1-201ENST00000512859 601 ntBASIC3.85□□□□□ -1.79
LRTM1Q9HBL6 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.85□□□□□ -1.79
LRTM1Q9HBL6 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.85□□□□□ -1.79
LRTM1Q9HBL6 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.85□□□□□ -1.79
LRTM1Q9HBL6 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LRTM1Q9HBL6 AC090948.2-201ENST00000607363 564 ntBASIC3.85□□□□□ -1.79
LRTM1Q9HBL6 AL135786.2-201ENST00000608422 615 ntBASIC3.85□□□□□ -1.79
LRTM1Q9HBL6 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.85□□□□□ -1.79
LRTM1Q9HBL6 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.85□□□□□ -1.79
LRTM1Q9HBL6 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.85□□□□□ -1.79
LRTM1Q9HBL6 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.85□□□□□ -1.79
LRTM1Q9HBL6 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LRTM1Q9HBL6 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
LRTM1Q9HBL6 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
LRTM1Q9HBL6 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
LRTM1Q9HBL6 RNU11-4P-201ENST00000391149 133 ntBASIC3.84□□□□□ -1.79
LRTM1Q9HBL6 AC093719.1-202ENST00000392735 373 ntBASIC3.84□□□□□ -1.79
LRTM1Q9HBL6 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.84□□□□□ -1.79
LRTM1Q9HBL6 HMGB3P19-201ENST00000403971 560 ntBASIC3.84□□□□□ -1.79
LRTM1Q9HBL6 RPL7AP73-201ENST00000413490 353 ntBASIC3.84□□□□□ -1.79
LRTM1Q9HBL6 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.84□□□□□ -1.79
LRTM1Q9HBL6 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.84□□□□□ -1.79
LRTM1Q9HBL6 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
LRTM1Q9HBL6 OR5BE1P-201ENST00000425977 939 ntBASIC3.84□□□□□ -1.79
LRTM1Q9HBL6 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.84□□□□□ -1.79
LRTM1Q9HBL6 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.84□□□□□ -1.79
LRTM1Q9HBL6 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.84□□□□□ -1.79
LRTM1Q9HBL6 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.84□□□□□ -1.79
LRTM1Q9HBL6 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.84□□□□□ -1.79
LRTM1Q9HBL6 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC3.84□□□□□ -1.79
LRTM1Q9HBL6 snoU13.22-201ENST00000459428 104 ntBASIC3.84□□□□□ -1.79
LRTM1Q9HBL6 AC091167.1-201ENST00000492017 396 ntBASIC3.84□□□□□ -1.79
LRTM1Q9HBL6 RPS27AP13-201ENST00000498403 237 ntBASIC3.84□□□□□ -1.79
LRTM1Q9HBL6 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC3.84□□□□□ -1.79
LRTM1Q9HBL6 AC010342.1-201ENST00000514047 877 ntBASIC3.84□□□□□ -1.79
LRTM1Q9HBL6 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.84□□□□□ -1.79
LRTM1Q9HBL6 MTND4LP31-201ENST00000514859 294 ntBASIC3.84□□□□□ -1.79
LRTM1Q9HBL6 IGKV2-23-201ENST00000518729 323 ntBASIC3.84□□□□□ -1.79
LRTM1Q9HBL6 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
LRTM1Q9HBL6 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.84□□□□□ -1.79
LRTM1Q9HBL6 MTCO1P49-201ENST00000523429 802 ntBASIC3.84□□□□□ -1.79
LRTM1Q9HBL6 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.84□□□□□ -1.79
LRTM1Q9HBL6 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC3.84□□□□□ -1.79
LRTM1Q9HBL6 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC3.84□□□□□ -1.79
LRTM1Q9HBL6 AC006116.5-201ENST00000591936 559 ntBASIC3.84□□□□□ -1.79
LRTM1Q9HBL6 MIR8059-201ENST00000620427 81 ntBASIC3.84□□□□□ -1.79
LRTM1Q9HBL6 OR5BE1P-202ENST00000641168 1176 ntBASIC3.84□□□□□ -1.79
LRTM1Q9HBL6 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
LRTM1Q9HBL6 UBE3AP2-201ENST00000429033 2259 ntBASIC3.84□□□□□ -1.79
LRTM1Q9HBL6 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
LRTM1Q9HBL6 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
LRTM1Q9HBL6 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
LRTM1Q9HBL6 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.84□□□□□ -1.79
LRTM1Q9HBL6 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
LRTM1Q9HBL6 AC012020.1-201ENST00000624541 1728 ntBASIC3.84□□□□□ -1.8
LRTM1Q9HBL6 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
LRTM1Q9HBL6 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.84□□□□□ -1.8
LRTM1Q9HBL6 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
LRTM1Q9HBL6 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
LRTM1Q9HBL6 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
LRTM1Q9HBL6 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.83□□□□□ -1.8
LRTM1Q9HBL6 OR11H4-201ENST00000315409 1082 ntBASIC3.83□□□□□ -1.8
LRTM1Q9HBL6 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
LRTM1Q9HBL6 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LRTM1Q9HBL6 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
LRTM1Q9HBL6 MIR670-201ENST00000390142 98 ntBASIC3.83□□□□□ -1.8
LRTM1Q9HBL6 ZNF603P-201ENST00000405613 487 ntBASIC3.83□□□□□ -1.8
LRTM1Q9HBL6 RPL23AP48-201ENST00000406913 488 ntBASIC3.83□□□□□ -1.8
LRTM1Q9HBL6 RNU6-628P-201ENST00000410675 107 ntBASIC3.83□□□□□ -1.8
LRTM1Q9HBL6 USP12PY-201ENST00000427677 1064 ntBASIC3.83□□□□□ -1.8
LRTM1Q9HBL6 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.83□□□□□ -1.8
LRTM1Q9HBL6 ARL4AP4-201ENST00000434170 518 ntBASIC3.83□□□□□ -1.8
LRTM1Q9HBL6 HMGB1P37-201ENST00000439613 609 ntBASIC3.83□□□□□ -1.8
LRTM1Q9HBL6 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.83□□□□□ -1.8
LRTM1Q9HBL6 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
LRTM1Q9HBL6 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms