Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 RNU6-1066P-201ENST00000363573 105 ntBASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 RNY4P14-201ENST00000363656 96 ntBASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 MTCO3P40-201ENST00000392516 676 ntBASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 AC025750.1-201ENST00000399891 379 ntBASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 AL450992.3-201ENST00000413192 568 ntBASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 OR51A3P-201ENST00000413596 924 ntBASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 HMGB1P11-201ENST00000413899 637 ntBASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 NUP35P2-201ENST00000416748 943 ntBASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 AC069157.1-201ENST00000421749 137 ntBASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 CRIP1P1-201ENST00000427567 185 ntBASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 AC079807.1-201ENST00000429993 481 ntBASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 BX276092.6-201ENST00000430476 250 ntBASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 AL451074.3-201ENST00000437709 472 ntBASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 RPS12P17-201ENST00000438591 377 ntBASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 RPS4XP4-201ENST00000443195 763 ntBASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 GEMIN2P1-201ENST00000454246 752 ntBASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 BX276092.8-201ENST00000455722 250 ntBASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 AC021205.1-201ENST00000468797 348 ntBASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 AC074386.1-201ENST00000476560 767 ntBASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 ARL4AP2-201ENST00000507378 601 ntBASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 AC048346.1-201ENST00000510247 144 ntBASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 MTND3P22-201ENST00000510932 243 ntBASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 RNU6-430P-201ENST00000517078 107 ntBASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 GTF2IP11-201ENST00000526931 420 ntBASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 AK6P1-201ENST00000540219 478 ntBASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 SS18L2P2-201ENST00000583960 235 ntBASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 BNIP3P8-201ENST00000597863 560 ntBASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 AC027243.2-201ENST00000602530 724 ntBASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 AC008536.2-201ENST00000607284 349 ntBASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 AC018690.1-201ENST00000608144 626 ntBASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 AC103710.4-201ENST00000609301 899 ntBASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 UBE2Q2P2-203ENST00000613592 761 ntBASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 AL096712.1-201ENST00000614561 159 ntBASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 AC112204.3-201ENST00000623822 332 ntBASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.18□□□□□ -1.58
SEC61A2Q9H9S3 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 MFSD8-219ENST00000641228 2559 ntBASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 RNU1-150P-201ENST00000362491 162 ntBASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 RN7SKP15-201ENST00000364742 309 ntBASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 Y_RNA.295-201ENST00000364918 102 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms