Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 RNU6-796P-201ENST00000391086 107 ntBASIC4.95□□□□□ -1.62
EBF3Q9H4W6 U3.22-201ENST00000391120 215 ntBASIC4.95□□□□□ -1.62
EBF3Q9H4W6 RNU6-648P-201ENST00000410190 107 ntBASIC4.95□□□□□ -1.62
EBF3Q9H4W6 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.95□□□□□ -1.62
EBF3Q9H4W6 E2F6P2-201ENST00000420708 748 ntBASIC4.95□□□□□ -1.62
EBF3Q9H4W6 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.95□□□□□ -1.62
EBF3Q9H4W6 RPS27AP7-201ENST00000422792 455 ntBASIC4.95□□□□□ -1.62
EBF3Q9H4W6 OSTCP5-201ENST00000425293 453 ntBASIC4.95□□□□□ -1.62
EBF3Q9H4W6 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
EBF3Q9H4W6 RPL23AP1-201ENST00000428990 471 ntBASIC4.95□□□□□ -1.62
EBF3Q9H4W6 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.95□□□□□ -1.62
EBF3Q9H4W6 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.95□□□□□ -1.62
EBF3Q9H4W6 AL358794.1-201ENST00000445689 381 ntBASIC4.95□□□□□ -1.62
EBF3Q9H4W6 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC4.95□□□□□ -1.62
EBF3Q9H4W6 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.95□□□□□ -1.62
EBF3Q9H4W6 AC073387.1-201ENST00000453261 709 ntBASIC4.95□□□□□ -1.62
EBF3Q9H4W6 OFD1P7Y-201ENST00000454643 1155 ntBASIC4.95□□□□□ -1.62
EBF3Q9H4W6 AL445433.1-201ENST00000457507 257 ntBASIC4.95□□□□□ -1.62
EBF3Q9H4W6 OR11I1P-201ENST00000486033 954 ntBASIC4.95□□□□□ -1.62
EBF3Q9H4W6 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.95□□□□□ -1.62
EBF3Q9H4W6 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.95□□□□□ -1.62
EBF3Q9H4W6 AC010374.1-201ENST00000503762 1237 ntBASIC4.95□□□□□ -1.62
EBF3Q9H4W6 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC4.95□□□□□ -1.62
EBF3Q9H4W6 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.95□□□□□ -1.62
EBF3Q9H4W6 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC4.95□□□□□ -1.62
EBF3Q9H4W6 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.95□□□□□ -1.62
EBF3Q9H4W6 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4.95□□□□□ -1.62
EBF3Q9H4W6 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.95□□□□□ -1.62
EBF3Q9H4W6 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC4.95□□□□□ -1.62
EBF3Q9H4W6 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.95□□□□□ -1.62
EBF3Q9H4W6 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.95□□□□□ -1.62
EBF3Q9H4W6 AP000916.1-201ENST00000533869 835 ntBASIC4.95□□□□□ -1.62
EBF3Q9H4W6 AL110118.1-201ENST00000553543 400 ntBASIC4.95□□□□□ -1.62
EBF3Q9H4W6 NDUFAF4P1-201ENST00000559425 519 ntBASIC4.95□□□□□ -1.62
EBF3Q9H4W6 AC090888.1-201ENST00000561335 1141 ntBASIC4.95□□□□□ -1.62
EBF3Q9H4W6 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.95□□□□□ -1.62
EBF3Q9H4W6 AC103987.3-201ENST00000582071 292 ntBASIC4.95□□□□□ -1.62
EBF3Q9H4W6 CCDC58P3-201ENST00000590792 430 ntBASIC4.95□□□□□ -1.62
EBF3Q9H4W6 BMS1P7-201ENST00000602440 1052 ntBASIC4.95□□□□□ -1.62
EBF3Q9H4W6 RNF138P2-201ENST00000603490 592 ntBASIC4.95□□□□□ -1.62
EBF3Q9H4W6 AC099785.1-201ENST00000605697 437 ntBASIC4.95□□□□□ -1.62
EBF3Q9H4W6 AC018695.5-201ENST00000605872 315 ntBASIC4.95□□□□□ -1.62
EBF3Q9H4W6 AC004492.1-201ENST00000607036 742 ntBASIC4.95□□□□□ -1.62
EBF3Q9H4W6 AL359757.1-201ENST00000623176 255 ntBASIC4.95□□□□□ -1.62
EBF3Q9H4W6 AP000676.3-201ENST00000623299 569 ntBASIC4.95□□□□□ -1.62
EBF3Q9H4W6 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
EBF3Q9H4W6 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.95□□□□□ -1.62
EBF3Q9H4W6 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
EBF3Q9H4W6 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
EBF3Q9H4W6 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.95□□□□□ -1.62
EBF3Q9H4W6 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
EBF3Q9H4W6 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
EBF3Q9H4W6 AL442639.1-201ENST00000625030 1899 ntBASIC4.94□□□□□ -1.62
EBF3Q9H4W6 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.94□□□□□ -1.62
EBF3Q9H4W6 MTND4P34-201ENST00000572715 1371 ntBASIC4.94□□□□□ -1.62
EBF3Q9H4W6 AC026951.1-201ENST00000559530 2459 ntBASIC4.94□□□□□ -1.62
EBF3Q9H4W6 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
EBF3Q9H4W6 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
EBF3Q9H4W6 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
EBF3Q9H4W6 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
EBF3Q9H4W6 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
EBF3Q9H4W6 SNORD113.2-201ENST00000364166 89 ntBASIC4.94□□□□□ -1.62
EBF3Q9H4W6 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
EBF3Q9H4W6 AC068538.1-201ENST00000376856 336 ntBASIC4.94□□□□□ -1.62
EBF3Q9H4W6 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.94□□□□□ -1.62
EBF3Q9H4W6 RNU6-481P-201ENST00000384194 107 ntBASIC4.94□□□□□ -1.62
EBF3Q9H4W6 RNU6-1242P-201ENST00000391052 103 ntBASIC4.94□□□□□ -1.62
EBF3Q9H4W6 AC002524.1-201ENST00000411687 547 ntBASIC4.94□□□□□ -1.62
EBF3Q9H4W6 BTF3L4P1-201ENST00000413813 468 ntBASIC4.94□□□□□ -1.62
EBF3Q9H4W6 ATG4AP1-201ENST00000416893 538 ntBASIC4.94□□□□□ -1.62
EBF3Q9H4W6 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.94□□□□□ -1.62
EBF3Q9H4W6 AC013429.2-201ENST00000418798 781 ntBASIC4.94□□□□□ -1.62
EBF3Q9H4W6 AL358176.3-201ENST00000420757 454 ntBASIC4.94□□□□□ -1.62
EBF3Q9H4W6 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.94□□□□□ -1.62
EBF3Q9H4W6 PRELID3BP10-201ENST00000431957 584 ntBASIC4.94□□□□□ -1.62
EBF3Q9H4W6 CYCSP11-201ENST00000436426 315 ntBASIC4.94□□□□□ -1.62
EBF3Q9H4W6 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
EBF3Q9H4W6 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
EBF3Q9H4W6 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC4.94□□□□□ -1.62
EBF3Q9H4W6 AL356981.1-201ENST00000454879 684 ntBASIC4.94□□□□□ -1.62
EBF3Q9H4W6 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.94□□□□□ -1.62
EBF3Q9H4W6 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.94□□□□□ -1.62
EBF3Q9H4W6 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.94□□□□□ -1.62
EBF3Q9H4W6 AP000942.1-201ENST00000463969 747 ntBASIC4.94□□□□□ -1.62
EBF3Q9H4W6 AL672167.3-201ENST00000465951 960 ntBASIC4.94□□□□□ -1.62
EBF3Q9H4W6 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.94□□□□□ -1.62
EBF3Q9H4W6 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.94□□□□□ -1.62
EBF3Q9H4W6 AC021146.7-201ENST00000509604 775 ntBASIC4.94□□□□□ -1.62
EBF3Q9H4W6 AC010625.1-201ENST00000511296 403 ntBASIC4.94□□□□□ -1.62
EBF3Q9H4W6 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.94□□□□□ -1.62
EBF3Q9H4W6 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC4.94□□□□□ -1.62
EBF3Q9H4W6 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC4.94□□□□□ -1.62
EBF3Q9H4W6 AC010306.1-201ENST00000523223 1117 ntBASIC4.94□□□□□ -1.62
EBF3Q9H4W6 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC4.94□□□□□ -1.62
EBF3Q9H4W6 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.94□□□□□ -1.62
EBF3Q9H4W6 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.94□□□□□ -1.62
EBF3Q9H4W6 AC106734.1-201ENST00000568646 663 ntBASIC4.94□□□□□ -1.62
EBF3Q9H4W6 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.94□□□□□ -1.62
EBF3Q9H4W6 RN7SL802P-201ENST00000577858 299 ntBASIC4.94□□□□□ -1.62
EBF3Q9H4W6 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 285.8 ms