Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AC064836.2-201ENST00000609491 462 ntBASIC5.52□□□□□ -1.53
VPS11Q9H270 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS11Q9H270 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS11Q9H270 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.52□□□□□ -1.53
VPS11Q9H270 AP001005.3-201ENST00000622049 129 ntBASIC5.52□□□□□ -1.53
VPS11Q9H270 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS11Q9H270 AC099654.5-201ENST00000636479 350 ntBASIC5.52□□□□□ -1.53
VPS11Q9H270 AL596275.2-207ENST00000641188 675 ntBASIC5.52□□□□□ -1.53
VPS11Q9H270 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
VPS11Q9H270 AL445437.1-201ENST00000623157 3087 ntBASIC5.52□□□□□ -1.53
VPS11Q9H270 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.52□□□□□ -1.53
VPS11Q9H270 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VPS11Q9H270 AC022031.1-201ENST00000585985 2593 ntBASIC5.52□□□□□ -1.53
VPS11Q9H270 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VPS11Q9H270 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VPS11Q9H270 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
VPS11Q9H270 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VPS11Q9H270 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VPS11Q9H270 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
VPS11Q9H270 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VPS11Q9H270 FGF7P2-201ENST00000332473 296 ntBASIC5.51□□□□□ -1.53
VPS11Q9H270 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VPS11Q9H270 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VPS11Q9H270 RNA5SP477-201ENST00000362639 119 ntBASIC5.51□□□□□ -1.53
VPS11Q9H270 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC5.51□□□□□ -1.53
VPS11Q9H270 SNORA75-201ENST00000384158 137 ntBASIC5.51□□□□□ -1.53
VPS11Q9H270 AC093719.1-202ENST00000392735 373 ntBASIC5.51□□□□□ -1.53
VPS11Q9H270 MIR1277-201ENST00000408536 78 ntBASIC5.51□□□□□ -1.53
VPS11Q9H270 RNU6-77P-201ENST00000410554 91 ntBASIC5.51□□□□□ -1.53
VPS11Q9H270 RNU6-920P-201ENST00000410926 92 ntBASIC5.51□□□□□ -1.53
VPS11Q9H270 RN7SKP33-201ENST00000410942 340 ntBASIC5.51□□□□□ -1.53
VPS11Q9H270 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC5.51□□□□□ -1.53
VPS11Q9H270 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.51□□□□□ -1.53
VPS11Q9H270 AC114814.2-201ENST00000419195 485 ntBASIC5.51□□□□□ -1.53
VPS11Q9H270 RPL19P16-201ENST00000433839 588 ntBASIC5.51□□□□□ -1.53
VPS11Q9H270 AC007679.3-201ENST00000434035 414 ntBASIC5.51□□□□□ -1.53
VPS11Q9H270 AC092809.1-201ENST00000441469 474 ntBASIC5.51□□□□□ -1.53
VPS11Q9H270 RPL37P3-201ENST00000456825 293 ntBASIC5.51□□□□□ -1.53
VPS11Q9H270 AC021660.1-201ENST00000465006 554 ntBASIC5.51□□□□□ -1.53
VPS11Q9H270 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.51□□□□□ -1.53
VPS11Q9H270 RN7SL583P-201ENST00000475692 287 ntBASIC5.51□□□□□ -1.53
VPS11Q9H270 AC091959.2-201ENST00000477363 321 ntBASIC5.51□□□□□ -1.53
VPS11Q9H270 RN7SL741P-201ENST00000482473 289 ntBASIC5.51□□□□□ -1.53
VPS11Q9H270 AL117692.1-201ENST00000494283 713 ntBASIC5.51□□□□□ -1.53
VPS11Q9H270 BNIP3P41-201ENST00000503774 571 ntBASIC5.51□□□□□ -1.53
VPS11Q9H270 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.51□□□□□ -1.53
VPS11Q9H270 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC5.51□□□□□ -1.53
VPS11Q9H270 EIF3KP3-201ENST00000514461 639 ntBASIC5.51□□□□□ -1.53
VPS11Q9H270 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.51□□□□□ -1.53
VPS11Q9H270 AC025881.1-201ENST00000518851 512 ntBASIC5.51□□□□□ -1.53
VPS11Q9H270 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC5.51□□□□□ -1.53
VPS11Q9H270 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.51□□□□□ -1.53
VPS11Q9H270 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VPS11Q9H270 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC5.51□□□□□ -1.53
VPS11Q9H270 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VPS11Q9H270 AC010198.2-201ENST00000550612 259 ntBASIC5.51□□□□□ -1.53
VPS11Q9H270 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
VPS11Q9H270 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC5.51□□□□□ -1.53
VPS11Q9H270 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.51□□□□□ -1.53
VPS11Q9H270 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.51□□□□□ -1.53
VPS11Q9H270 AC115085.1-201ENST00000588924 229 ntBASIC5.51□□□□□ -1.53
VPS11Q9H270 AC108738.1-201ENST00000603703 237 ntBASIC5.51□□□□□ -1.53
VPS11Q9H270 AC091805.2-201ENST00000603848 235 ntBASIC5.51□□□□□ -1.53
VPS11Q9H270 AC009027.1-201ENST00000604510 479 ntBASIC5.51□□□□□ -1.53
VPS11Q9H270 AC009994.1-201ENST00000606889 253 ntBASIC5.51□□□□□ -1.53
VPS11Q9H270 AC009779.8-202ENST00000607990 932 ntBASIC5.51□□□□□ -1.53
VPS11Q9H270 AC004948.1-201ENST00000609858 672 ntBASIC5.51□□□□□ -1.53
VPS11Q9H270 Y_RNA.804-201ENST00000615262 101 ntBASIC5.51□□□□□ -1.53
VPS11Q9H270 AC024884.1-201ENST00000620583 399 ntBASIC5.51□□□□□ -1.53
VPS11Q9H270 AL683826.1-201ENST00000624104 627 ntBASIC5.51□□□□□ -1.53
VPS11Q9H270 MIR193BHG-214ENST00000641765 509 ntBASIC5.51□□□□□ -1.53
VPS11Q9H270 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.51□□□□□ -1.53
VPS11Q9H270 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VPS11Q9H270 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.51□□□□□ -1.53
VPS11Q9H270 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VPS11Q9H270 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
VPS11Q9H270 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
VPS11Q9H270 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VPS11Q9H270 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
VPS11Q9H270 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
VPS11Q9H270 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
VPS11Q9H270 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VPS11Q9H270 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
VPS11Q9H270 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VPS11Q9H270 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VPS11Q9H270 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
VPS11Q9H270 AC092326.2-201ENST00000624772 1561 ntBASIC5.5□□□□□ -1.53
VPS11Q9H270 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VPS11Q9H270 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VPS11Q9H270 AC011477.1-204ENST00000623416 1325 ntBASIC5.5□□□□□ -1.53
VPS11Q9H270 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
VPS11Q9H270 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.5□□□□□ -1.53
VPS11Q9H270 STX3-208ENST00000641815 3236 ntBASIC5.5□□□□□ -1.53
VPS11Q9H270 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VPS11Q9H270 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VPS11Q9H270 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
VPS11Q9H270 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
VPS11Q9H270 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VPS11Q9H270 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VPS11Q9H270 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms