Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 RNU6-317P-201ENST00000384031 107 ntBASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 SNORA16A-201ENST00000384342 137 ntBASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 VDAC2P1-201ENST00000399358 958 ntBASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 TMSB4XP8-201ENST00000402089 135 ntBASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 RNU2-42P-201ENST00000410697 113 ntBASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 RPL7P8-201ENST00000411964 730 ntBASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 TMSB4XP6-201ENST00000415187 135 ntBASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 Z99497.1-201ENST00000421282 135 ntBASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 AC104333.2-201ENST00000422630 192 ntBASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 AL049610.1-201ENST00000423374 372 ntBASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 AL133173.1-201ENST00000423458 397 ntBASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 TMSB4XP1-201ENST00000424567 135 ntBASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 CENPIP1-201ENST00000425713 902 ntBASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 CYCSP51-201ENST00000443545 318 ntBASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 AL450996.1-201ENST00000445574 1202 ntBASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 AC073909.1-201ENST00000447112 999 ntBASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 MTCO3P11-201ENST00000455103 774 ntBASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 AC092754.1-201ENST00000472975 479 ntBASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 RPS24P16-201ENST00000497294 392 ntBASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 AC231760.1-201ENST00000498002 260 ntBASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 AF213884.2-201ENST00000510417 903 ntBASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 AC006349.1-201ENST00000555526 235 ntBASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 AL390726.5-202ENST00000564800 256 ntBASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 MIR4505-201ENST00000582238 73 ntBASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 AP004247.3-201ENST00000608682 624 ntBASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 AC109583.2-201ENST00000617367 129 ntBASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 AC009878.1-201ENST00000621819 340 ntBASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 AC073348.1-201ENST00000623002 331 ntBASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 AL356473.1-201ENST00000406203 1408 ntBASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
AMBRA1Q9C0C7 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.61
AMBRA1Q9C0C7 AC006484.1-201ENST00000435086 1884 ntBASIC4.96□□□□□ -1.61
AMBRA1Q9C0C7 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.61
AMBRA1Q9C0C7 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.96□□□□□ -1.61
AMBRA1Q9C0C7 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 RNU6-839P-201ENST00000363347 108 ntBASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 U3.4-201ENST00000363352 213 ntBASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 AL161909.1-201ENST00000397390 712 ntBASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 AC004022.2-201ENST00000413824 193 ntBASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 RPL7P4-203ENST00000430239 730 ntBASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 MED14P1-201ENST00000430517 648 ntBASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 RPS24P8-201ENST00000431490 402 ntBASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 MTND1P30-201ENST00000441241 901 ntBASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 MTCO1P19-201ENST00000443487 500 ntBASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 AL034418.1-201ENST00000448675 860 ntBASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 DDX39BP2-208ENST00000453923 258 ntBASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 RN7SL72P-201ENST00000460697 269 ntBASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms