Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 TANC2-201ENST00000389520 6404 ntTSL 5 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 TOGARAM1-202ENST00000361577 6247 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 COL12A1-201ENST00000322507 11723 ntAPPRIS P2 TSL 1 (best) BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 SLFN11-202ENST00000394566 5030 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 CASC15-203ENST00000605917 4461 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AL034403.1-201ENST00000399414 885 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AL451074.5-201ENST00000415894 435 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AL449283.1-202ENST00000418249 604 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 RPS12P10-201ENST00000427031 377 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AC007559.1-201ENST00000428736 355 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 RPL34P6-201ENST00000432390 345 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 UBE2D3P1-201ENST00000436669 444 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AL139156.3-201ENST00000454802 394 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 RPL23AP37-201ENST00000479658 549 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 RPS3AP14-201ENST00000483907 780 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 RNU6-567P-201ENST00000516746 107 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AC006581.1-201ENST00000545706 496 ntTSL 3 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 GARSP1-201ENST00000570895 719 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 RNU4ATAC-201ENST00000580972 127 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AP002360.4-201ENST00000606980 481 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 MIR6127-201ENST00000614019 109 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AC010133.1-201ENST00000615809 842 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AP006248.3-201ENST00000623580 594 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 SH3BP2-201ENST00000356331 9211 ntAPPRIS P3 TSL 1 (best) BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 STARD5-201ENST00000302824 4871 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 BCL2L13-203ENST00000355028 4458 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 SHROOM4-203ENST00000460112 8919 ntTSL 5 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AP3B1-201ENST00000255194 5838 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 OTUD4P1-201ENST00000237841 3067 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 CACNA1E-203ENST00000360108 6970 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 RBM7-204ENST00000541475 6725 ntTSL 2 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 CIT-201ENST00000261833 8578 ntAPPRIS P3 TSL 1 (best) BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AL138889.1-203ENST00000530000 6593 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 ZNF587-201ENST00000339656 6882 ntAPPRIS P3 TSL 1 (best) BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 OR11H13P-201ENST00000359695 979 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 RNU6-784P-201ENST00000384330 106 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 MIR34B-201ENST00000385076 84 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 MTCO2P8-201ENST00000412213 658 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 RPL26P27-201ENST00000414397 437 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 ATG4AP1-201ENST00000416893 538 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 RHEBP2-201ENST00000450289 600 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 RPL12P39-201ENST00000455456 496 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AC096992.1-201ENST00000459808 709 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AC023598.1-201ENST00000472521 361 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 HPRT1P2-201ENST00000505250 544 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AC091435.1-201ENST00000505442 584 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 RNA5SP147-201ENST00000516493 109 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 RNU6-1057P-201ENST00000517162 102 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AC024940.3-201ENST00000538551 316 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AC025884.1-201ENST00000556034 378 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 PSMA6P4-201ENST00000603247 718 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AL031658.2-201ENST00000616850 651 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AL354950.2-201ENST00000617939 290 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AC009237.17-201ENST00000618111 748 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AL603755.1-201ENST00000619504 163 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 MAN1A2-201ENST00000356554 8576 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 GABPAP-201ENST00000419271 1356 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms